MCA_05384_1

Browser: contigD:1194955-1195645-

RNA-seq: read pairs 37, FPKM 2.0, percentile rank 11.7% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0840

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   24 - 229

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 23

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   16 - 23

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   3 - 15

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 23

   SignalP euk
   SignalP-noTM (SignalP-noTM)

Protein sequence

>MCA_05384_1
MNLALHLLSTLYFIFHLSLQSEAAAILVTKNPSSSYELMQKYAAQAIGEHSSSTKITFQESELSHLFKNAIEIDLDSVEA
SHKVELIKQETKNNDNNGKIFATTDLKKINLEKDQNSLSHRFCSFGCNVCGPTIFNPVSSSSFNSVGVCKPIYPKRPTHF
SYNAPAGNNAVVDSKKKKKNSFHLIIWDEFGCKGNAKVFKFTNAKQNVCIDIRSYIKLSPLQSVSYLFI

GO term prediction