Protein
MCA_05352_1
Length
978 amino acids
Gene name: WHI3
Description: Protein WHI3; mRNA-binding protein
Browser: contigD:1106712-1109649+
RNA-seq: read pairs 1487, FPKM 18.8, percentile rank 39.7% (100% = highest expression)
Protein function
| Annotation: | WHI3 | Protein WHI3; mRNA-binding protein | |
|---|---|---|---|
| EGGNOG: | 0QDTE | WHI3 | RNA binding protein |
| SGD closest match: | S000005141 | WHI3 | Protein WHI3 |
| CGD closest match: | CAL0000182709 | WHI3 | mRNA-binding protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A167EPW5_9ASCO | 87.50% | 120 | 2e-63 | mRNA-binding protein WHI3 OS=Sugiyamaella lignohabitans GN=WHI3 PE=4 SV=1 |
| UniRef50_A0A167EPW5 | 87.50% | 120 | 6e-60 | mRNA-binding protein WHI3 n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167EPW5_9ASCO |
| A0A0J9XKE7_GEOCN | 83.61% | 122 | 2e-62 | Similar to Saccharomyces cerevisiae YNL197C WHI3 RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci OS=Geotrichum candidum GN=BN980_GECA26s00736g PE=4 SV=1 |
| A0A060THH3_BLAAD | 82.50% | 120 | 3e-61 | ARAD1D38500p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D38500g PE=4 SV=1 |
| A0A1E3PJV1_9ASCO | 83.33% | 120 | 3e-62 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82679 PE=4 SV=1 |
| MIA_04792_1 | 83.47% | 121 | 3e-59 | MIA_04792_1 |
| Q6C1Y4_YARLI | 77.50% | 120 | 6e-56 | YALI0F12375p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F12375g PE=4 SV=1 |
| A0A1E4TIS4_9ASCO | 74.53% | 106 | 2e-47 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_55487 PE=4 SV=1 |
| WHI3_YEAST | 65.14% | 109 | 6e-38 | Protein WHI3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WHI3 PE=1 SV=1 |
| A0A1D8PR24_CANAL | 60.16% | 123 | 1e-35 | mRNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=WHI3 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9400
Predicted cleavage: 104
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
900
978
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd12245 (RRM_scw1_like)
-
mobidb-lite (disord...)
Protein sequence
>MCA_05352_1 MLKSQTYNPSINFRTSNSPPFPVNSTVSMSNQPPPPNLMSNHIPFAATNPNLYQNPSNNMLHTYSSSNLGHISSASTSSI NTSSSSQSKAQQQLSHPSNVSRQVTSTGSQSGTSSLSNSASSSTTKIMSASTPFYPSVSGFQSFIPSQYNQNAQTNNSFA SSNNSIKGQSIVPPNMANPNLSIAHQAPPQQSQSSQPQPSNSFFSSSVSPILDDANSNATGNTAASNYPCLAIMNLPRDI QEREFEILFTFANEYLYSELQKSHTIAEDGLPTAVGGLVYFKTLSAANTAYATLTRNTHLFTPKEYLARSSTLSTSPFAI TVEIRSNRSNISADSLSSMSRLGSFNMNSAISTNGATNNTNIHRISNGTSNLSQSQSQTQYKNMSRFIFPTGNGAASASN GTTGSTPSQQQQQQQQQQQTGQQQQPQQQSSLEMHPPQKFQEIYEGGPINNSVFSPASPRGIFPMSDEFVPRMTGKSLLL ESQGREDEEYNDIVKDVGVSWFSQGGPSSSTNIGGGGNSSVFAVGNSITSPGYNNYPNNMTISQPSSQQISPQENNSASL HKPVSPPNATTTTTTTTNNTTTASASSTSPSITNASTSNNNNTSLGETNKASDSKLAVGQQLQGQTSSQKQAQLSSSNNN NTTTTTTNSSTASSNSSSSSSAVVKPGSQSPTKGKTQVHGKPTNTGGSNNNNNNSINGGYNNSNNKHNNTTSNRSTTLSS GSSNNNNNNQWNINEGNKKNNRNSTTRSFQNLSINGNNSTTHSGGATSASGVSSSTSPNNNNNGGGNSPVEGNKIVVPYS PTNGTNAIHIMQNGGRVLPPANPADQNPPCNTLYVGNLPPDTNEDELKDLFSTCRGYKRLCFRTKANGPMCFVEFEDVTY ATRALEELYGIGLSNSVKGGIRLSFSKNPLGVKPQNNNNNNNMSSGGNNNSSSSSSSNNNGNRTKNYYNNSNNSHHNNNN NISNHSNNNNNNHNNDSL
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.