Protein
MCA_05339_1
Length
661 amino acids
Browser: contigD:1061323-1063309+
RNA-seq: read pairs 1309, FPKM 24.4, percentile rank 47.0% (100% = highest expression)
Protein function
| EGGNOG: | 0PJ6M | FG01055.1 | KH domain RNA binding protein |
|---|---|---|---|
| SGD closest match: | S000000437 | PBP2 | PAB1-binding protein 2 |
| CGD closest match: | CAL0000187269 | PBP2 | Pbp2p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03221_1 | 35.47% | 234 | 2e-25 | MIA_03221_1 |
| A0A0J9XCI1_GEOCN | 55.45% | 101 | 8e-25 | Similar to Saccharomyces cerevisiae YBR233W PBP2 RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein OS=Geotrichum candidum GN=BN980_GECA09s01671g PE=4 SV=1 |
| UniRef50_A0A0J9XCI1 | 55.45% | 101 | 2e-21 | Similar to Saccharomyces cerevisiae YBR233W PBP2 RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XCI1_GEOCN |
| A0A060T6L1_BLAAD | 44.12% | 102 | 1e-18 | ARAD1B13024p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B13024g PE=4 SV=1 |
| A0A1E3PLS5_9ASCO | 38.71% | 93 | 9e-13 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_41881 PE=4 SV=1 |
| Q6C067_YARLI | 37.63% | 93 | 3e-10 | YALI0F27401p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F27401g PE=4 SV=1 |
| A0A161HLH2_9ASCO | 40.96% | 83 | 4e-10 | Pbp2p OS=Sugiyamaella lignohabitans GN=PBP2 PE=4 SV=1 |
| Q5A8H8_CANAL | 33.70% | 92 | 5e-07 | Pbp2p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PBP2 PE=4 SV=1 |
| PBP2_YEAST | 33.00% | 100 | 1e-06 | PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PBP2 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0381
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
661
Detailed signature matches
no IPR
Unintegrated signatures
-
-
PS50084 (KH_TYPE_1)
-
cd00105 (KH-I)
-
mobidb-lite (disord...)
Residue annotation
-
nucleic acid bindi...
-
G-X-X-G motif cd00...
Protein sequence
>MCA_05339_1 MPPKRRKRNSTTAQASEPADVQEEHQSKKLHLDETDQTTENESNKAKAEALNDDLDEISIKTESPHKDENTENNSTVEKS KSQPQPPPLPPQKVNNTTVIPPDPKSKSQLVQLSDEALEVTISIRILVSVSLGEILEDQNSPISKLLLDIDSSGSDPTRI AEISLEKLRPGVTERVATLTGKASAVSHAISIISFYASLRKVLKNPEQAFKLLSKLLLLPDNEVIQPQAKLPPLPSTRKG RSRGRKSSATAPDAQTKQQLSELAAIKKQLEALKAILIEATLLIPEYTIIKKNYENPSRTLIDNTQQKTQNGVNLSSYKE GKEDNLVPIESNINTDGRFSLSRQSASQNFLFKLQNKTNTIIDLPAYSLPMSSDRALYIRGTHFESVRNCILKFICHTFI LDSLNRKENSESDDEESEDEFISNVDFEPVPITGVYGHPAIFRTQQLNIPLLSSNPYHNPALLPTVNKERLAFDSIKPTE AAGDNEDTTMAVDEDTVIPDAPSDQSYTTAVTASVSQSSNQPANAITEKGTNKMYSGPAVAPDGTVHLMVEGGMRQAQLQ AQAGIPGQQLTQSVFIPNFIVGAVIGKQGSKINEIRQASGSMIRINDENSVITTELTPGDGNIDMAAERKVTIIGTPESN QLALVLLHQRVESEIHNHTRT
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Cellular Component
None predicted.