Protein
MCA_05318_1
Length
1,250 amino acids
Gene name: RME1
Description: Zinc finger protein RME1
Browser: contigD:996959-1000712+
RNA-seq: read pairs 13, FPKM 0.1, percentile rank 3.9% (100% = highest expression)
Protein function
| Annotation: | RME1 | Zinc finger protein RME1 | |
|---|---|---|---|
| EGGNOG: | 0PNEQ | RME1 | ZnF_C2H2 |
| SGD closest match: | S000003276 | RME1 | Zinc finger protein RME1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01548_1 | 56.08% | 148 | 3e-46 | MIA_01548_1 |
| A0A0J9XL74_GEOCN | 46.71% | 152 | 8e-42 | Similar to Saccharomyces cerevisiae YGR044C RME1 Zinc finger protein involved in control of meiosis OS=Geotrichum candidum GN=BN980_GECA32s00648g PE=4 SV=1 |
| UniRef50_A0A0J9XL74 | 46.71% | 152 | 2e-38 | Similar to Saccharomyces cerevisiae YGR044C RME1 Zinc finger protein involved in control of meiosis n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XL74_GEOCN |
| A0A1E3PME7_9ASCO | 46.60% | 103 | 2e-23 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82283 PE=4 SV=1 |
| RME1_YEAST | 38.98% | 118 | 8e-23 | Zinc finger protein RME1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RME1 PE=1 SV=1 |
| A0A060TBM2_BLAAD | 40.52% | 116 | 6e-22 | ARAD1D33000p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D33000g PE=4 SV=1 |
| Q6CH39_YARLI | 39.84% | 123 | 2e-19 | YALI0A12925p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A12925g PE=4 SV=1 |
| A0A1E4THW8_9ASCO | 28.76% | 153 | 3e-11 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_122641 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2425
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1250
Detailed signature matches
-
-
SSF48371 (ARM repeat)
-
no IPR
Unintegrated signatures
-
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05318_1 MSFSLHQPVSPSSSTKSPPPISKLIAAVQDPELRKKLPKPRITHATISKLSSLTFSSRFIKKKCDLSTKRIKRKNNKNIC SSLFNSPVSPNTTTTTTTTTTTTTTTTSTTKGRVLPVRLSVAPNDGIDSLLKRVTKNYKLGKGMVEIYQTRIVHNNLTSP NYLANPNTRNNVNNDVDINNSLKNSNVSCKIQDFLAPLHVLTETTQTTTKIANSTFTTTNIKTVTTPITSSHRLTELSKE EEESLLNDQQSKSPKLGEKRNSTFLDSEILQSKRKKLDNTSPHLKSKESTLQCISPIASSPPGSPTTVFDFFFCNESFVS SPLFPPSNAGSIPTSLNLSSLKKSTVDISNNAQQHPLSPVNAAHEYSLRLCQYLSSCPASPMPTSTCENTGNSYENINNT LKSIIGNKTDLLQNIENENNQSQKQVAVVAPSNVIRKVQLPRTFLGLDNLDEDKTQDEKGEDGKGEIQERNVSIYEGAGY EDRRTVAIDETASSFTHDTTTSSTTQPPHSDISTHGNYKSQKMTLSEYAGTELVSTPRSFSLEHSGGWNSVNTNIRSSDQ TSSQLGSLQNSPNQVIVYNSHTFTKTTSNTTLFPPKILFSSSFSSSTSSADPVLNTPIVSSHITTTMHTDLHDSSDSSSS SNLQPMTTYPLESQYHQTSSQQLNNYNQLSYRQQQQQQQQQQQQQWILAEAVDINDKNSINPDQENSYTYRRTYNSPRSL SPQLVNSQINKTAWRPANLKSEMQFHFESNTSSSQPASLAASASPATTCSSSCSNDHIPSPMSPAVVNNYNNYMTERCEP IVPKDLDILNPSNQYIQPFYNLPPPVSRMQSHPEAARQYFQQWPYPQYSAQEIPSLLSFQPQPLMNLNSPQEPAHTNWIA DPTYKGERFPQQVVYTDIRQGHSLHGVQEAIEPTREAYGKSHISRQQQRLAGYQQVQSTFRPTNTLFHSKGVEFPNIIHP VSAGEFEYNNRVIEEKSPSFMETKVSQNKVQEKVDDEDDDDDDDDDDDEEESDDEDDYEEEHPNFQVPKVEDIPIDYKRK RNTSPKLLKVTLKPPTKHEAPQKSHNEKPQPPVAKPASRGGRSYKALEEKAWTNELITLKKQTHSQLLASDETRLAKANS NKRGKYYCTHCDVQFTTISDLCYHMDQVDIIRPYHCNHTECPWYVCGFPNASEWHRHIKTQHGKAVNISCELCQKLFARK DSLKRHVHLVHENVDSRYNKRKRMELLDAATAVSNNNGTTSTFSIRARKR
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0005488 binding
Cellular Component
None predicted.