Protein

MCA_05317_1

Length
478 amino acids

Browser: contigD:993318-995083+

RNA-seq: read pairs 547, FPKM 14.1, percentile rank 32.6% (100% = highest expression)

Protein function

EGGNOG:0PKHVFG09550.1(GTP)-binding protein
SGD closest match:S000005037YPT53GTP-binding protein YPT53
CGD closest match:CAL0000189481CAALFM_CR06520CARab family GTPase

Protein alignments

%idAln lengthE-value
A0A0J9XIM1_GEOCN79.87%1545e-83Similar to Saccharomyces cerevisiae YKR014C YPT52 Endosomal Rab family GTPase OS=Geotrichum candidum GN=BN980_GECA17s00109g PE=4 SV=1
A0A161HH49_9ASCO79.86%1443e-81Rab family GTPase YPT52 OS=Sugiyamaella lignohabitans GN=YPT52 PE=4 SV=1
UniRef50_A0A161HH4979.86%1448e-78Rab family GTPase YPT52 n=5 Tax=saccharomyceta TaxID=716545 RepID=A0A161HH49_9ASCO
A0A1E3PMA5_9ASCO73.72%1563e-79Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50479 PE=4 SV=1
MIA_05901_177.78%1537e-75MIA_05901_1
A0A060T4M5_BLAAD79.17%1445e-74ARAD1A18854p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A18854g PE=4 SV=1
RYL2_YARLI72.73%1435e-72Ras-like GTP-binding protein RYL2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RYL2 PE=3 SV=2
YPT53_YEAST43.85%1303e-36GTP-binding protein YPT53 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPT53 PE=1 SV=1
A0A1D8PT80_CANAL42.21%1544e-36Rab family GTPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR06520CA PE=4 SV=1
A0A1E4TFZ3_9ASCO48.72%1172e-34Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_108700 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.5038

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 450 478

Detailed signature matches

  1. Family IPR001806
    Small GTPase superfamily
    1. PF00071 (Ras)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  3. Domain IPR005225
    Small GTP-binding protein domain
    1. TIGR00231
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.30.70...
  2. G3DSA:3.40.50...
  3. PR00449 (RASTRNSFRMNG)
  4. PS51419 (RAB)
  5. SM00173 (ras_sub_4)
  6. SM00174 (rho_sub_3)
  7. SM00175 (rab_sub_5)
  8. SM00176 (ran_sub_2)
  9. cd00154 (Rab)
  10. mobidb-lite (disord...)

Residue annotation

  1. Rab subfamily moti...
  2. G1 box cd00154
  3. GTP/Mg2+ binding s...
  4. Rab subfamily moti...
  5. Switch I region cd...
  6. G2 box cd00154
  7. Rab family motif 1...
  8. GDI interaction si...
  9. effector interacti...
  10. GEF interaction si...
  11. Rab family motif 2...
  12. G3 box cd00154
  13. Switch II region c...
  14. Rab family motif 3...
  15. Rab family motif 4...
  16. Rab family motif 5...
  17. Rab subfamily moti...
  18. G4 box cd00154

Protein sequence

>MCA_05317_1
MSLDAKIVILGAQGVGKTSFVVRYVHDKFQQGNASTIGASFMAKKVLVEDSIVRLQIWDTAGQERFRSMAPMYYRSAHCG
IICYDITSIDSFYAMHSWLLELKRNLDDDIMIHIVGTKLDLVNENPQRRQVPFDMCVKYASKYLVRRKNKNEFNETPYLN
SRQQQQQQQQKSKSHRHRHSLAATGILSLTNNNTNSSTSPSHSRTKSVSHLHSFNTEQYFQPPTRSKSHLISNNSNKSNN
LNNRNRRHTFSQHHKINQQQQQQQIASSSSNKNKQLKRLSTPISLNPTKSIDSNENEYENNNNNNTGNLTSYNDLDDISN
RYHNNDNDSSMTINNDNNNISNNNNTIPSSIAIPNKSSFNESEHDTSLEYKGLSDNLYNTNDNNNNNDEYNDFYNDNESI
DESEFEFASSCCHEISAKDDLGIDEVFEVITRRLVEQMRLRMEDRRYQEEEEEAAHRQQTVYLHQDDDYENKTSSKCC

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003924 GTPase activity
GO:0005525 GTP binding

Cellular Component

None predicted.