Protein
MCA_05292_1
Length
787 amino acids
Browser: contigD:893165-895605+
RNA-seq: read pairs 1134, FPKM 17.8, percentile rank 38.2% (100% = highest expression)
Protein function
| EGGNOG: | 0Q081 | RNA polymerase II elongation factor |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XJF5_GEOCN | 42.62% | 305 | 2e-60 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA22s00384g PE=4 SV=1 |
| UniRef50_A0A0J9XJF5 | 42.62% | 305 | 4e-57 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XJF5_GEOCN |
| MIA_03376_1 | 59.41% | 170 | 5e-43 | MIA_03376_1 |
| A0A060TFS0_BLAAD | 46.56% | 131 | 2e-30 | ARAD1D16830p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D16830g PE=4 SV=1 |
| Q6CAQ5_YARLI | 30.03% | 293 | 4e-27 | YALI0D00803p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D00803g PE=4 SV=1 |
| A0A167CCG3_9ASCO | 44.00% | 125 | 4e-26 | RNA polymerase II transcription elongation factor SpELL OS=Sugiyamaella lignohabitans GN=ell1 PE=4 SV=1 |
| A0A1E3PMK2_9ASCO | 43.70% | 135 | 3e-26 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50575 PE=4 SV=1 |
| A0A1E4TG36_9ASCO | 36.67% | 120 | 2e-20 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31579 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2542
Predicted cleavage: 13
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
787
Detailed signature matches
-
-
SSF46785 ("Winged h...)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05292_1 MSRNISSLPNSALLHPLKLPSDGNVPFGGYLKLPSQALQAIKSAKGADIKINFTSPSLITLTIGSTNYTIHSSPQPTNIN LYKSDPNNPSSFTNVGKITHRLNIQDADISATSILKSQTDQFLREKEANKTTLIPISNSNSQLSNNNSGGPRTPLLNISS PSKTPSSPSNFQSSTSLRNKPKRLAIISSKPLNSMNLTSAPNRLAHLLALGPLSFETLLQKIRIPQQDLENLLKQYGHKD SSSLDPTASPNGDIYSLADQYYKELRVWDWKLYTPSQRSQVIKDSIAVFDRLGLPADHVARRCLIDPKIRQAQKEAAEAA REAQYQAENEEKLLEKKAEEKAAMEHMAQLAAKNKATRIASGGSNVNGIIPVTNNTSSNSTNGSNASNNGPKPINIKKVT KSSAPKIPEKPSLPAIPTESTVIANKKHSPSTSPALNDTPAPRNRSSSTSSENSLVSLPSVKKPLKSTTTVKTSKKRTLS SQDSDYYSSGSESIKVKRQALDQNENLPTSGEKDAAILVSQFKRLYSKYAKLYNQLNTSLPKSSSLGPNKTFSSQVFKSK HMDSATLKKQTQNLQLLLSMHKQLESLKSELWSLPPPKTYTNSNTSNPTSHNKPSSIRSNKIDITKLNVPSANNAKTQNS SNNSTATAAKSVSVSSTKPVIRKRIPKKTTTNNNNSNNTKTSSSSPSTSPLSPLPRASNSTSSSAKSRSSLPSTLPTLPN STSPALSTASKRSPSINGRPNYVAKQSSSSSSLPTSSATRRNTSSSPISSKSRSYSTTMKVNSRINK
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.