Protein
MCA_05255_1
Length
1,362 amino acids
Gene name: VPS54
Description: Vacuolar protein sorting-associated protein 54
Browser: contigD:773845-777934-
RNA-seq: read pairs 1525, FPKM 13.8, percentile rank 32.2% (100% = highest expression)
Protein function
| Annotation: | VPS54 | Vacuolar protein sorting-associated protein 54 | |
|---|---|---|---|
| KEGG: | K17600 | VPS54 | vacuolar protein sorting-associated protein 54 |
| EGGNOG: | 0PGGC | FG06778.1 | GARP complex component |
| SGD closest match: | S000002434 | VPS54 | Vacuolar protein sorting-associated protein 54 |
| CGD closest match: | CAL0000193179 | orf19.2007 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03888_1 | 45.50% | 1189 | 0.0 | MIA_03888_1 |
| A0A0J9X5S2_GEOCN | 40.66% | 1087 | 0.0 | Similar to Saccharomyces cerevisiae YDR027C VPS54 Component of the GARP (Golgi-associated retrograde protein) complex OS=Geotrichum candidum GN=BN980_GECA03s03805g PE=4 SV=1 |
| UniRef50_A0A0J9X5S2 | 40.66% | 1087 | 0.0 | Similar to Saccharomyces cerevisiae YDR027C VPS54 Component of the GARP (Golgi-associated retrograde protein) complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X5S2_GEOCN |
| A0A167DUU9_9ASCO | 35.51% | 1166 | 0.0 | Vps54p OS=Sugiyamaella lignohabitans GN=VPS54 PE=4 SV=1 |
| A0A060T843_BLAAD | 37.85% | 959 | 1e-177 | ARAD1C33418p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C33418g PE=4 SV=1 |
| A0A1E3PM97_9ASCO | 35.24% | 925 | 6e-146 | Vps54-domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_5418 PE=4 SV=1 |
| Q6CEC1_YARLI | 29.15% | 844 | 2e-96 | YALI0B16822p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B16822g PE=4 SV=1 |
| A0A1E4TB17_9ASCO | 28.95% | 874 | 1e-78 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_69829 PE=4 SV=1 |
| A0A1D8PGA1_CANAL | 24.61% | 841 | 5e-57 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2007 PE=4 SV=1 |
| VPS54_YEAST | 24.42% | 737 | 3e-54 | Vacuolar protein sorting-associated protein 54 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS54 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1533
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1200
1362
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05255_1 MDTKQDIPRLSVDTSSRRQSHNYQTHESASSILRSPVASSFASHRRSSSISGLPLAAGYAPSIAGSSSVAGSMSYNQTSP MQPWQGVPVGMNTLAADQHRLGVNSIADIVDGHIASSPAHLLGNLNNANNSNMPQRTPNSRYSLSAATSPFFGLSSSQIS QQSSSLSSLSAQAAAANFKPPTAKDIPPVTLTQIPKVSRAELRAYLKEISSEYDQFYESRLGSEFPTLNAPKAPLSRKGS YSALSVATASEAGTTTGRRRSSAGEANTTGRRRRSSATQSLQTSVSVLSNAFDSLGITTAVPKAESNETGGYLGTNFDSV SQQDLGSQEESSSPKITPLSTIPAVFFEADFQLDNPRTFDIVSEKSSIIQTLDDGDSNKENNGSVVRKGLANNSILQEKL SWYIDTVELHLIHEISTASHSFFSALDNLQHINLQAKKCLASIQQLRQDLKKIDESRLQLATKSLKLRQRRKNVDKLLQA LLQIQVILENSDKAEAFLLKENELDKCLQYLDALDEIIAGKGQPKITKKQIKDEEDGDDDDDEYNELVKEWTEGWKYPIC DVRSVKGLEELRESLVVLRTQAGNSFAKTFTTVLCNDLKSHYEGVIPQDTLNRLGKVLKKPVKPKVAMGIDDMDSESVPM SQSASNTSDASLGSHPINNSYLDISPELREKLEETIMGLVRSNNVQGALKQYSEAVIKDAKSLVRRYLPSTSSSASQKDD DAVSISSNMTGMTGMATSEKSTSLAVLLRAMTPKQFEEMITNLYTKLSEFFRRLATHQKLLLDISVTLITKEEQQQKNKK KSSTAASTPVIDISELLKNSIDSSLSRLVKVFNVRREQNSTMDIQSIVNFYSLSFMFLYECEAICGLDIDGSLGNTITNQ LKMYITNMHRIKINTMMNLLEKDQWKEEEITNEFQDLVDQMVLAGHSDPYQWIESSRQVLNESSLDATKSESTESKEPTN GDEAKKKKNKKLYIGNGVFIIPRCAIQSVSMLEEYMRLTVLFPPSPHLTGEILNNSCEFLNKFNTRSEQLIISAGATKIE GGLKHITAKTLALCAQALNVMITLVPYIKECGKRHYLGDNNNNGEDDEGKFQVVSEEFEKVIKNLKTHQDSIYAKFVTLM SDKMNMHGSAMRKIVWDEQPDDLQPNKYMQSLVKDTTVLAKILANYLPKNPYLMVISQVFDIYKRRLLEEYQTNCAIPYN TNGKSSFIFKKQIIKDNVLRDARYFEEKLASIEGSGNTGQILVETLNAYGLLEDTKKSNNNNTNKNSLEKEDAAKGEALF DAGDFEDEDEEVPPPAAPEISEKEDSSHEEEKSTSKESSPDISNEKSSVDEILDEESKNKEKEENNNNDDEKSKDEKDDG SN
GO term prediction
Biological Process
GO:0042147 retrograde transport, endosome to Golgi
Molecular Function
None predicted.
Cellular Component
None predicted.