MCA_05239_1

Browser: contigD:722917-724774+

RNA-seq: read pairs 4, FPKM 0.1, percentile rank 3.2% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2856

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   618 - 618

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   27 - 597

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 26

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   21 - 26

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   9 - 20

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 8

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 26

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TRANSMEMBRANE (Tran...)
   598 - 617

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
9. mobidb-lite (disord...)
   356 - 598

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   73 - 162

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_05239_1
MTRRLLNKIATVGAITAIALSGSANASEPTETLSDSVTSFTTSTVTSTIGFSILPTNTFSSFTNSSAILSTLTSDSTTST
VNPTTSGSSVTGETTTTESSSIVTTYTELSSSTLSNTTTVTDGTSSGTSSSSVIVPPSSGSNSTISGSTDVSGTGIPTSS
DFANSTITSTPVITSTVTSVEPITTTITVCDDNACVTKTTTVTVPKTTATDVPLTTVTSTVTICDDHACVTKTTTVTEIC
TPCITATSPPVTESTTITYTSEITTTKTTTVCNPDCKETSVVETLTTTICETLPVTKPPVETKTVTVCDDDDCSTTVITT
KPPVKTKPPVETKPPVKTTKTITVCDDYDKCSTTVVTHKPPAETKPPTPPTKPEEPEKPEQPEEPEKPEQPEKPAEPEKP
EQPEQPEQPEKPEEPEKPEEPEKPAEPEKPAEPEKPAEPEKPAEPEKPAVPEQPEQPEEPEKPEKPEQPEQPEEPEKPAE
PEKPAEPEEPEQPEQPEQPEQPAEPEKPEQPEQPEQPEQPAEPEKPAEPEQPEEPEQPEEPEQPEQPEQPEEPEQPEQPE
QPEQPEQPAEPEQPGVPEQPEQPAQPEQPSPSLPQVNGANILSVSSSLLVAVFITFLF

GO term prediction