Protein
MCA_05213_1
Length
357 amino acids
Gene name: GBP2
Description: Putative single-strand telomeric DNA-binding protein
Browser: contigD:640051-641206-
RNA-seq: read pairs 18377, FPKM 634.3, percentile rank 95.2% (100% = highest expression)
Protein function
| Annotation: | GBP2 | Putative single-strand telomeric DNA-binding protein | |
|---|---|---|---|
| EGGNOG: | 0PJTU | FG09840.1 | RNP domain-containing protein |
| SGD closest match: | S000004949 | HRB1 | Protein HRB1 |
| CGD closest match: | CAL0000178755 | GBP2 | Single-stranded telomeric DNA-binding/mRNA-binding protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06040_1 | 57.23% | 339 | 5e-129 | MIA_06040_1 |
| A0A0J9XA61_GEOCN | 53.65% | 315 | 6e-109 | Similar to Saccharomyces cerevisiae YNL004W HRB1 Poly(A+) RNA-binding protein OS=Geotrichum candidum GN=BN980_GECA06s04993g PE=4 SV=1 |
| Q6C5Y5_YARLI | 50.78% | 319 | 1e-103 | YALI0E14058p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E14058g PE=4 SV=2 |
| UniRef50_M7NMS5 | 47.37% | 342 | 8e-95 | Uncharacterized protein n=4 Tax=Ascomycota TaxID=4890 RepID=M7NMS5_PNEMU |
| A0A167FLU2_9ASCO | 47.22% | 324 | 7e-95 | Hrb1p OS=Sugiyamaella lignohabitans GN=HRB1 PE=4 SV=1 |
| A0A060SZ12_BLAAD | 49.51% | 305 | 2e-94 | ARAD1C01606p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C01606g PE=4 SV=1 |
| A0A1E3PGZ5_9ASCO | 50.64% | 314 | 1e-91 | RNA-binding domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_8976 PE=4 SV=1 |
| A0A1D8PQM1_CANAL | 33.14% | 344 | 7e-57 | Single-stranded telomeric DNA-binding/mRNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GBP2 PE=4 SV=1 |
| HRB1_YEAST | 32.79% | 305 | 8e-51 | Protein HRB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRB1 PE=1 SV=2 |
| A0A1E4T9Q8_9ASCO | 23.10% | 303 | 2e-17 | Polyadenylate-binding protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_70868 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1055
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
357
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd00590 (RRM_SF)
-
mobidb-lite (disord...)
Protein sequence
>MCA_05213_1 MTTTSTTTPSTQDRRVYVGNLSYNVKGGQLREFMSQAGEVVRADVLTLPSGRSKGCGIVEYSTSEEAQKAIEQLSNVDLN GRPVFVREDREAEAKTGAPKFSHEHKPRVNAGGSGGEPAQVYVTNIPFNSNWRELKDLFRIAGDVIRCDIFESHGRSKGT GVVLFQTVSDANNAINKLNGYHFKGRPLEVRMDKFYNPNASSRYGSSGKFTKPSFTPPPAKTNSPFTEGATGNGPMSDTV FVSNLPWATTDQDLYELFQSVGKVKQAEIKYDHTGRSSGAGVVKFDTPASAQIAIEKLTAYVYGKRPLSLSFVKYPADST ANTITVPTTAPVQSTEATAPSPVPVPAETAAPPAPVV
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.