Protein
MCA_05208_1
Length
224 amino acids
Browser: contigD:627830-629467+
RNA-seq: read pairs 4216, FPKM 231.5, percentile rank 89.7% (100% = highest expression)
Protein function
| KEGG: | K12881 | THOC4 | THO complex subunit 4 |
|---|---|---|---|
| EGGNOG: | 0PRWJ | FG10830.1 | mRNA export from nucleus |
| SGD closest match: | S000002789 | YRA1 | RNA annealing protein YRA1 |
| CGD closest match: | CAL0000200451 | orf19.5917.3 | RNA-binding protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05102_1 | 60.92% | 238 | 2e-80 | MIA_05102_1 |
| A0A1E3PN69_9ASCO | 45.33% | 225 | 3e-44 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82470 PE=4 SV=1 |
| UniRef50_A0A1E3PN69 | 45.33% | 225 | 7e-41 | Uncharacterized protein n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PN69_9ASCO |
| A0A060T3B8_BLAAD | 48.54% | 171 | 3e-42 | ARAD1C39336p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C39336g PE=4 SV=1 |
| B5RSK4_YARLI | 51.90% | 158 | 7e-42 | YALI0A20867p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A20867g PE=4 SV=1 |
| YRA1_YEAST | 33.19% | 238 | 4e-30 | RNA annealing protein YRA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YRA1 PE=1 SV=2 |
| A0A1E4TB27_9ASCO | 36.49% | 148 | 2e-23 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3580 PE=4 SV=1 |
| A0A1D8PK11_CANAL | 34.87% | 152 | 2e-21 | RNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5917.3 PE=4 SV=1 |
| A0A0J9XA61_GEOCN | 30.85% | 94 | 1e-07 | Similar to Saccharomyces cerevisiae YNL004W HRB1 Poly(A+) RNA-binding protein OS=Geotrichum candidum GN=BN980_GECA06s04993g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2452
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
224
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05208_1 MSSNLDKSLDEIISSKPKPQRRRSSGRGVSKSAPKPSSSSSSSTRRRSGPSKPSAASAPKKPVLDETAKLFDRIIISHLP TDVTETAVRDYFSHEVGPISSCNIAYNSKGQSTGVVTITFKRPGDAHKASLRFNGTAIDNGAQRMKVELVMDPSKKPLST RLNPVPPEAIAQKTNKTSRPSSRGNSGSRKSTKAKESKPKSNRRPKKTLEELDAEMADYFEKKA
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.