Protein
MCA_05183_1
Length
260 amino acids
Description: Transposon derived polyprotein
Browser: contigD:562090-562935-
RNA-seq: read pairs 2, FPKM 0.1, percentile rank 3.5% (100% = highest expression)
Protein function
| Annotation: | Transposon derived polyprotein | ||
|---|---|---|---|
| EGGNOG: | 0QDZF | Reverse transcriptase (RNA-dependent DNA polymerase) | |
| CGD closest match: | CAL0000201372 | orf19.2372 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| UniRef50_A5DZY6 | 45.28% | 106 | 3e-21 | Uncharacterized protein n=2 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DZY6_LODEL |
| MIA_02154_1 | 40.19% | 107 | 3e-22 | MIA_02154_1 |
| YCH4_YEAST | 42.73% | 110 | 2e-20 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2 |
| A0A161HJI4_9ASCO | 28.24% | 131 | 6e-09 | Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_4398 PE=4 SV=1 |
| A0A1D8PR73_CANAL | 29.36% | 109 | 8e-09 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2372 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.4944
Protein family membership
None predicted.
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
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CYTOPLASMIC_D... (C...)
-
NON_CYTOPLASM... (N...)
-
-
TRANSMEMBRANE (Tran...)
Protein sequence
>MCA_05183_1 MIIRNNNSNINRANFCDPTTFNIAYVSKRINESLNSHNGIGGSKYKPTLKQVMSSFSEFHDFLHRLFDEISAHDGSGNLM YLLFNDDWSPQLLAQITPFKSSVKLEKLKPEEAGKPIKDPKFFRSIIGKLIFASNTCRPDISTAVSILSQYLKEPREAHL TCAKTVVKYLHNTADFSLKFRNTEGAPLVMGYADANLTNNADSKSRSGYIIKIYGNIVSWMSKKLLKHCYNKCYKNLCLS LTLPYIYFYFCFSFFCSFIY
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.