Protein

MCA_05182_1

Length
508 amino acids

Description: protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains

Browser: contigD:558770-560322-

RNA-seq: read pairs 0, FPKM 0.0, percentile rank 0.8% (100% = highest expression)

Protein function

Annotation:protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains
EGGNOG:0PQVYFGSG_14035conserved hypothetical protein
CGD closest match:CAL0000175723orf19.2866Uncharacterized protein

Protein alignments

%idAln lengthE-value
UniRef50_A2QPH428.88%3671e-33Transposase Tan1-Aspergillus niger n=3 Tax=Aspergillus TaxID=5052 RepID=A2QPH4_ASPNC
A0A1D8PMN0_CANAL26.01%3464e-26Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2866 PE=4 SV=1
Q6C7B4_YARLI26.71%2929e-18YALI0E02178p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E02178g PE=4 SV=1
MIA_01692_123.71%3501e-14MIA_01692_1
A0A0J9XG26_GEOCN25.20%2541e-07Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA15s02320g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.3982

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 450 508

Detailed signature matches

  1. Domain IPR006600
    HTH CenpB-type DNA-binding domain
    1. PS51253 (HTH_CENPB)
  2. Domain IPR004875
    DDE superfamily endonuclease domain
    1. PF03184 (DDE_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_05182_1
MPRKDSYTADEVYEIFRKPDEKRKLWALSLEYKVPYTSLLRRHHKFLHGQNDPDERFTMTPKQEKMLFMFILYLTRRKTP
PTATDIRHLGAKMLGRKNMLSSNWFIRYMRHHEVLKKKKLKHLDAPRVIRENGEKLIEDFFEDYLELQATYGFDDDEIYN
IDEAGFKIGSATEGATYIVPEEARHIKSYDSSERVTVVEVISKSGKVGLPMLIYKGKNVMAGWIPEGKLKTAVIMETSGS
GFMNEKLFLKWLDFHFNKDDGKYRLLIMDEEVNKRLAQYKLIPLLFPSHMTNILQPLDRSCFGVAKILTRSKTRHQFGEG
VEPEKALFLENYLDTRLKAFSPETIKKGYELAGLNAKGPEIALAEYRRQLHKLPVFFPTTEEPVDEEIVDEPQEYKIIGK
SPEKYLKEVLSYGDKATYKEMLLSNERFARAEKEIIRLRRMVSERDSKIFLLEENQKHLKDKKDQALKKCSRTRKRAATE
KTQGYTVERPILGPDYTDVMTELSKDQT

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding

Cellular Component

None predicted.