Protein

MCA_05177_1

Length
416 amino acids

Description: protein with Harbinger transposase-derived nuclease domain (endonuclease of the DDE superfamily)

Browser: contigD:548930-550181+

RNA-seq: read pairs 1, FPKM 0.0, percentile rank 2.0% (100% = highest expression)

Protein function

Annotation:protein with Harbinger transposase-derived nuclease domain (endonuclease of the DDE superfamily)
EGGNOG:0PQVRInherit from KOG: transposon protein

Protein alignments

%idAln lengthE-value
UniRef50_A0A0N7KMU741.60%3632e-73Os07g0116050 protein n=13 Tax=BOP clade TaxID=359160 RepID=A0A0N7KMU7_ORYSJ
MIA_01706_126.85%2981e-15MIA_01706_1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.8199
Predicted cleavage: 88

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 416

Detailed signature matches

  1. Domain IPR027806
    Harbinger transposase-derived nuclease domain
    1. PF13359 (DDE_Tnp_4)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. Coil
  3. NON_CYTOPLASM... (N...)
  4. TMhelix
  5. TRANSMEMBRANE (Tran...)
  6. mobidb-lite (disord...)

Protein sequence

>MCA_05177_1
MVQITKVTKKSSEKLSLRRKKALFLVLLHYYIIVQTAVVAIQRKMFMAMVASCRFRNIVHNSALRGPAFVLELLNGHPTR
MFNILRVTPDCFIKLSSFLSERTSLRDTKVTVEEKLAIFLYITANNISNRCAQDRFQRGGCTISKAFHQVLDAFFSVKDE
VIEPPRHEKFPSITDDPRMVYFENCIGAIDETHIPITLPNGDESYRCRKGFPSLNVMVAVDFNMKFRNVHSGWEGSAHDA
RVLAHALENNFFVIPDGTYYLADAGYGISDKILTPYRNVRYHLKEYGNNTPRNGKELFNMRHSSLRNVVERAIGKFKNRF
KILKEASEYSADNVACLVISLAVVHNLIEDYNKTAKEILKEEKQLERYDDDDDDDDDEYFNNNNQSSYYGISTEARVVGS
DRRDAIDKKMWQNYKR

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.