Protein
MCA_05172_1
Length
317 amino acids
Browser: contigD:529473-530427-
RNA-seq: read pairs 505, FPKM 19.6, percentile rank 40.9% (100% = highest expression)
Protein function
| KEGG: | K20813 | TDG | thymine-DNA glycosylase [EC:3.2.2.29] |
|---|---|---|---|
| EGGNOG: | 0PHYS | FG00873.1 | dna glycosylase |
| CGD closest match: | CAL0000180470 | orf19.7442 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00584_1 | 43.49% | 315 | 2e-61 | MIA_00584_1 |
| A0A0J9XGL3_GEOCN | 36.42% | 302 | 3e-54 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA15s02837g PE=4 SV=1 |
| UniRef50_A0A0J9XGL3 | 36.42% | 302 | 6e-51 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XGL3_GEOCN |
| A0A161HK84_9ASCO | 44.39% | 205 | 2e-48 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_1623 PE=4 SV=1 |
| A0A060T5D2_BLAAD | 42.42% | 198 | 5e-41 | ARAD1B06270p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B06270g PE=4 SV=1 |
| A0A1E3PU31_9ASCO | 36.50% | 200 | 5e-40 | G/U mismatch-specific DNA glycosylase (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_14725 PE=4 SV=1 |
| A0A1E4THP0_9ASCO | 35.42% | 240 | 4e-35 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_121832 PE=4 SV=1 |
| Q6C2V5_YARLI | 46.23% | 106 | 5e-28 | YALI0F04796p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F04796g PE=4 SV=1 |
| A0A1D8PKI0_CANAL | 31.40% | 242 | 1e-23 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7442 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0639
Protein family membership
- G/U mismatch-specific DNA glycosylase (IPR015637)
Domains and repeats
-
Domain
1
50
100
150
200
250
317
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Residue annotation
-
active site cd10028
-
SUMO-1 interface c...
Protein sequence
>MCA_05172_1 MDNENVQKSLPSFGNKLDKFYYLGKRPVEKRKFLISKEHEEGEEKKQKCFKSNNNNHQLINRGRQSTTRKQNKKLNTKQT YAASSSSLITQLKPLKPLLAPELRCVFVGFNPGIETARVGHYYAHRSNRFWKLLYESGCVDEKLSCKDDQMLLEKYQYGF HDLVAQPTKGISELSSDEMLEGVPLLEQDLAKVRPRVVAIIGKGIWESIYRYKKKRKLNPKNFKWGVQPSIVDGKEHQSD DNKGLVQSGYADNNAIYKDINTLRSCCFLSSTNATIVVLPSTSGLVVSPSSREMLALWKDLHMTIIQAESDDLKVKT
GO term prediction
Biological Process
GO:0006281 DNA repair
Molecular Function
GO:0019104 DNA N-glycosylase activity
Cellular Component
None predicted.