MCA_05171_1

Protein

Length

334 amino acids

RNA-seq: read pairs 973, FPKM 35.9, percentile rank 57.7% (100% = highest expression)

Protein function

EGGNOG:	0PQN4		Conserved glycine-rich protein

Protein alignments

	%id	Aln length	E-value
A0A0J9X938_GEOCN	52.56%	78	4e-19	Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA05s06709g PE=4 SV=1
UniRef50_A0A0J9X938	52.56%	78	8e-16	Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X938_GEOCN
MIA_01660_1	42.11%	76	7e-12	MIA_01660_1
A0A060SZL8_BLAAD	37.84%	74	4e-11	ARAD1C09152p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C09152g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2013
Predicted cleavage: 29

Protein family membership

None predicted.

Domains and repeats

None predicted.

Detailed signature matches

no IPR

Unintegrated signatures

CYTOPLASMIC_D... (C...)

211 - 334

PHOBIUS
CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
NON_CYTOPLASM... (N...)

22 - 183

PHOBIUS
NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
SIGNAL_PEPTIDE (Sig...)

1 - 21

PHOBIUS
SIGNAL_PEPTIDE (Signal Peptide)
SIGNAL_PEPTID... (S...)

14 - 21

PHOBIUS
SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
SIGNAL_PEPTID... (S...)

3 - 13

PHOBIUS
SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
SIGNAL_PEPTID... (S...)

1 - 2

PHOBIUS
SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
TMhelix

185 - 207

TMHMM
TMhelix (TMhelix)
TRANSMEMBRANE (Tran...)

184 - 210

PHOBIUS
TRANSMEMBRANE (Transmembrane region)
mobidb-lite (disord...)

90 - 170

MobiDB Lite
mobidb-lite (disorder_prediction)

Protein sequence

>MCA_05171_1
MKFSTLSATSAVVSSIQSVSGASLHKRNQGTIEKIEESSLSNTEIKIVSNSEVDIQTDQNINNDKDLEEIPSQSESNSFL
HVLNQIIQRSQFEKRRGGSSGGRVGGGGRIGGGSGGSSGGGSSGGSSGGGGSGGSTGGGSGSSGSSGGRPPPAGVAGGSR
PLPAGSRPLPAGYRPMMAPTYGGAFPGGAGALFLAGGVSLLGLVAFLALASSANDHLPGYWGNQNNVQTYTYNATVDNEP
YRVTCYCIMDQACGCDKNTDKEYFDALRQNKTIAKFEERDGVTYVYINGTAPVEDAQYYSQESSSTGEQSGAFSLDIPYS
AYLSLGIAGITLLL

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.