Protein
MCA_05111_1
Length
799 amino acids
Gene name: GRC3
Description: Polynucleotide 5'-hydroxyl-kinase GRC3
Browser: contigD:382006-384406+
RNA-seq: read pairs 633, FPKM 9.8, percentile rank 25.6% (100% = highest expression)
Protein function
| Annotation: | GRC3 | Polynucleotide 5'-hydroxyl-kinase GRC3 | |
|---|---|---|---|
| KEGG: | K06947 | GRC3 | polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] |
| EGGNOG: | 0PKBG | GRC3 | Polynucleotide 5'-kinase involved in rRNA processing (By similarity) |
| SGD closest match: | S000003958 | GRC3 | Polynucleotide 5'-hydroxyl-kinase GRC3 |
| CGD closest match: | CAL0000182248 | GRC3 | Polynucleotide 5'-hydroxyl-kinase GRC3 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04827_1 | 34.33% | 705 | 2e-115 | MIA_04827_1 |
| A0A167D3C0_9ASCO | 32.04% | 465 | 5e-53 | Grc3p OS=Sugiyamaella lignohabitans GN=GRC3 PE=4 SV=1 |
| UniRef50_A0A167D3C0 | 32.04% | 465 | 1e-49 | Grc3p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167D3C0_9ASCO |
| A0A0J9X4C8_GEOCN | 32.46% | 422 | 5e-46 | Similar to Saccharomyces cerevisiae YLL035W GRC3 Polynucleotide kinase present on rDNA that is required for efficient transcription termination by RNA polymerase I OS=Geotrichum candidum GN=BN980_GECA02s08304g PE=4 SV=1 |
| A0A1E3PEY6_9ASCO | 30.02% | 463 | 1e-43 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_67344 PE=4 SV=1 |
| A0A060T3M4_BLAAD | 32.07% | 396 | 3e-43 | ARAD1A17160p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A17160g PE=4 SV=1 |
| GRC3_CANAL | 27.46% | 437 | 1e-21 | Polynucleotide 5'-hydroxyl-kinase GRC3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GRC3 PE=3 SV=2 |
| GRC3_YEAST | 30.96% | 239 | 1e-17 | Polynucleotide 5'-hydroxyl-kinase GRC3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRC3 PE=1 SV=1 |
| GRC3_YARLI | 27.05% | 366 | 1e-17 | Polynucleotide 5'-hydroxyl-kinase GRC3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GRC3 PE=3 SV=1 |
| A0A1E4TF07_9ASCO | 26.14% | 153 | 4e-07 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_43947 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.3964
Predicted cleavage: 30
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
799
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05111_1 MTDSNTTTTTTSSPSIKKRKIKNGSSSRSASEVISDQLSQDVQPTRKSQKTAREIMEELRKNQQLQQDEEKDEEDDEEQE VQDKSMEEYSSDSSNQDNSDVGNTSTTTTLNLPVAISNFNPTFKNSKTFNSCHLFGMKKEESLVIQGQYLLTVQKGTVSI YGASLKSGSNSSYPVYAAFASALPKITCIKNENNTKQEQEENVIITNYNKEFLENKEFDAVIFIEPLTSGLETIPEYFPK YSNLWGYTDEEANYTTATSTVVGHPKPLYYGPSTIKSVTSYASWQVTANEICEDVFRKRATSIAFIAGPKNSGKSSFAKY LQNFFLSNQKNNNQQQHLYFLDCDPGQSEFSPPSCLSLTKQTKLNFSCAFSHSNFQLGDLIKCHSLGSYSPKDLPEYFLA CFEDLLTTFREEASQSSHASLLIINTPGWAKGQGLELLLEMIRLSQMSSVVFLGAKDLETFQDFHERLMAMSSYYQGGLI QRLCTPESPLTVSTINPSVQHNHDTMQQLFSATELRELQLLSYFHYSSKTSKFEFSCSTDSKTLAYIPPRRFQSSSSSSS SSQLTAENDQSLNRGALFSQIPILDKSHSNRFIRPRSILASRETLSGTNILSFGEQLYEAVIKRERELNVPIHGIAIVGI DGIKKKHLHICIENVIVSVLSVKAQVLNEYNQELIPLFMTEEESNIPSTKKNSTNVDSENEQESSSSYSSDNAEEEDKKE EKSLNVPLPLIPSQWLMDIINPKSTKSLGLAMIKSIDPVTGTLDLQTPIDEETLLQVQTNDEVLILFRGRIPLPSWTTL
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.