Protein
MCA_05093_1
Length
1,249 amino acids
Gene name: RRP12
Description: Ribosomal RNA-processing protein 12
Browser: contigD:340629-344379+
RNA-seq: read pairs 2444, FPKM 24.2, percentile rank 46.7% (100% = highest expression)
Protein function
| Annotation: | RRP12 | Ribosomal RNA-processing protein 12 | |
|---|---|---|---|
| KEGG: | K14794 | RRP12 | ribosomal RNA-processing protein 12 |
| EGGNOG: | 0PIGM | FG01553.1 | 90S preribosome component RRP12 |
| SGD closest match: | S000005933 | RRP12 | Ribosomal RNA-processing protein 12 |
| CGD closest match: | CAL0000188040 | orf19.7011 | mRNA-binding protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03815_1 | 57.29% | 1255 | 0.0 | MIA_03815_1 |
| A0A0J9X8Z6_GEOCN | 45.02% | 1284 | 0.0 | Similar to Saccharomyces cerevisiae YPL012W RRP12 Protein required for export of the ribosomal subunits OS=Geotrichum candidum GN=BN980_GECA05s06093g PE=4 SV=1 |
| UniRef50_A0A0J9X8Z6 | 45.02% | 1284 | 0.0 | Similar to Saccharomyces cerevisiae YPL012W RRP12 Protein required for export of the ribosomal subunits n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8Z6_GEOCN |
| A0A060TIG9_BLAAD | 42.85% | 1181 | 0.0 | ARAD1D46442p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D46442g PE=4 SV=1 |
| A0A1E3PN62_9ASCO | 39.77% | 1222 | 0.0 | NUC173-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50772 PE=4 SV=1 |
| A0A161HFD0_9ASCO | 41.57% | 1133 | 0.0 | Rrp12p OS=Sugiyamaella lignohabitans GN=RRP12 PE=4 SV=1 |
| A0A1D8PQQ7_CANAL | 39.83% | 1205 | 0.0 | mRNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7011 PE=4 SV=1 |
| Q6C6P9_YARLI | 39.68% | 1182 | 0.0 | YALI0E07425p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E07425g PE=4 SV=1 |
| RRP12_YEAST | 35.70% | 1199 | 0.0 | Ribosomal RNA-processing protein 12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP12 PE=1 SV=1 |
| A0A1E4TA55_9ASCO | 37.13% | 1072 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32196 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0282
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
200
400
600
800
1000
1249
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05093_1 MDAPLDSAALLGKLARIRDHKSSKLENQKKLAIILSAVEESLDEEKTERTPVAYFVSFLALLNQSVTDDEEDGIKNIELA SSTLYFLDLIAPYASPSLLKAKFVAILSKLRPVLASPKADAPILRSSIGILETLLSAQDAAGWALPPTQASPSRGLLGLM VFGLDPRPKVRKRAQLAISNILKAESTRNSESSTGLPAAALAAESSLNSCQTVLSEYKSYKANAKKGADPNAQNPSTSRL IHSMQLIKFVIINSTWPQELIDRLCEVLLSISRLSEVFIVTESFNVVEVLFNSIVSNKYVEVMPKLFESIIDLKPSVEDK SLAPAWFMIISKAIEAYTQLSPFDSLLLLPNVFTLVSDFFSSESEDIQSSAAHCLIAVCELGISQKVLLQNTPEHKKYAS QIDEVFESISSTLFQLLNVKYQSSWKDVMMVVVALSNALMWRSDPYMIKLFKVIGTLRSAETLSDGWQEADLVMGAAVKN IGPIKTLELFPLNLESDAKSSRPWLLPIIRDNTEFSQLKFFTDKMVNLSGQIEASISELANDKKSATKVKVLKTLVDQIW SLFPSFCHLPIDNLEESFTSDFAQLIMTVAYDYPELRNYIFSGLKNLIETNQAFIDGAFDENLLLLEIFNKEKAQHNMGH LKSFSLNILASLFNIFTVTPTDSRTQLLECSKAFLSITSPEDLETTFNRVSSILNESLKDASQGADKENDIPPTSATMLD LIIQMAPFLSEANITTLFTIFSTLCLNYKTSLIQKRTYRLFSTLAELPAGQALLKKHSGDVINLFIQTLNDIQPPARGQR LQAIASFLTILSPEDLYFIPSVISEVVIATKDLNEKTREAAFGLLVSMGQLMSQKGGKIDRSKIPDIPAELATVVDASLE EYITIIAAGLSDTTTHTQAATILALSRVVFEFKSSLQLEMLQELTSTVEMFLEHKGREVADATLGYIKVAVSSLPKEVVE PSLKNLIEHLLSWYREHSSHFKAKIKHLIERLIRIFGYDKVAENFPEDDLKFLNNIRKSKERAKRKKLQAATADEEGSGL ASHRNRKHFAQAEKFASEFDRALYDSSSDEEDEDGDVEMDDNNGKHNRSSNERFITEGDDPLDLLDSSALARIGTKNSNK KAGLSDSKKFKKDMDGKIIIKHLEAEDNDEDDDPLANIGNSLSAYEEAIKNGPVRDARGKYHYKRGRHNMDDADDMSDNE SSSKSSRKVGNNKRNDKLGPKKASGKNNRGFKGSADKKKKTAGNRRFYN
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005488 binding
Cellular Component
None predicted.