Protein
MCA_05033_1
Length
222 amino acids
Gene name: VPS20
Description: Vacuolar protein sorting-associated protein 20
Browser: contigD:186180-186849+
RNA-seq: read pairs 567, FPKM 31.4, percentile rank 53.9% (100% = highest expression)
Protein function
| Annotation: | VPS20 | Vacuolar protein sorting-associated protein 20 | |
|---|---|---|---|
| KEGG: | K12195 | CHMP6 | charged multivesicular body protein 6 |
| EGGNOG: | 0PPFV | VPS20 | Charged multivesicular body protein |
| SGD closest match: | S000004682 | VPS20 | Vacuolar protein sorting-associated protein 20 |
| CGD closest match: | CAL0000174239 | VPS20 | ESCRT-III subunit protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04829_1 | 49.46% | 186 | 1e-43 | MIA_04829_1 |
| A0A060SZ63_BLAAD | 55.78% | 147 | 2e-42 | ARAD1A17908p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A17908g PE=3 SV=1 |
| A0A0J9X658_GEOCN | 51.59% | 157 | 3e-42 | Similar to Saccharomyces cerevisiae YMR077C VPS20 Myristoylated subunit of ESCRTIII, the endosomal sorting complex required for transport of transmembrane proteins into the multivesicular body pathway OS=Geotrichum candidum GN=BN980_GECA02s08326g PE=3 SV=1 |
| A0A167D3A5_9ASCO | 54.55% | 154 | 1e-40 | ESCRT-III subunit protein VPS20 OS=Sugiyamaella lignohabitans GN=VPS20 PE=3 SV=1 |
| UniRef50_A0A1X2I6E9 | 49.68% | 155 | 3e-34 | Snf7 family n=5 Tax=Fungi TaxID=4751 RepID=A0A1X2I6E9_9FUNG |
| Q6C0V9_YARLI | 53.25% | 154 | 1e-36 | YALI0F21307p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F21307g PE=3 SV=1 |
| A0A1E3PF96_9ASCO | 42.13% | 197 | 1e-36 | SNF7 family protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84032 PE=3 SV=1 |
| A0A1E4TIL5_9ASCO | 45.71% | 140 | 9e-32 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_15288 PE=4 SV=1 |
| Q5AH99_CANAL | 33.66% | 202 | 9e-19 | ESCRT-III subunit protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VPS20 PE=3 SV=1 |
| VPS20_YEAST | 33.33% | 162 | 3e-15 | Vacuolar protein sorting-associated protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS20 PE=1 SV=3 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0631
Protein family membership
- Snf7 family (IPR005024)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF03357 (Snf7)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05033_1 MGNSTSKSPSVSKQDEAVLQLKLQRDSLKRYKKRITVIIEREHQVAKQCLQNGDKKRALLALKKKKYQENQVEELEKQMT TLEELTQSVEFAQLQQSFFKSLQQGNNILKELNKELSIEKVEKLLDDSSESIAYQNELNEMLSKNINPEDEMDVLEELEQ MEKEELNKNQLPDIHNKTKSSEDLQNAMPKVPKTKLPDVPTKKQEQQPEEEEDTKEKQMMAA
GO term prediction
Biological Process
GO:0007034 vacuolar transport
Molecular Function
None predicted.
Cellular Component
None predicted.