Protein
MCA_04939_1
Length
632 amino acids
Browser: contigC:4477310-4479209+
RNA-seq: read pairs 1612, FPKM 31.5, percentile rank 54.0% (100% = highest expression)
Protein function
| EGGNOG: | 0PGAY | PGUG_01391 | C2H2 finger and ankyrin domain protein |
|---|---|---|---|
| SGD closest match: | S000002456 | VMS1 | Protein VMS1 |
| CGD closest match: | CAL0000178143 | orf19.5368 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02606_1 | 50.23% | 647 | 0.0 | MIA_02606_1 |
| A0A0J9XB64_GEOCN | 45.15% | 649 | 3e-164 | Similar to Saccharomyces cerevisiae YDR049W VMS1 Component of a Cdc48p-complex involved in protein quality control OS=Geotrichum candidum GN=BN980_GECA08s03156g PE=4 SV=1 |
| UniRef50_A0A0J9XB64 | 45.15% | 649 | 6e-161 | Similar to Saccharomyces cerevisiae YDR049W VMS1 Component of a Cdc48p-complex involved in protein quality control n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XB64_GEOCN |
| A0A060T7U2_BLAAD | 41.54% | 520 | 3e-124 | ARAD1C24728p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C24728g PE=4 SV=1 |
| A0A167FD65_9ASCO | 40.80% | 603 | 2e-117 | Vms1p OS=Sugiyamaella lignohabitans GN=VMS1 PE=4 SV=1 |
| Q5A5N1_CANAL | 39.89% | 559 | 6e-103 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5368 PE=4 SV=1 |
| VMS1_YEAST | 35.02% | 651 | 3e-95 | Protein VMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMS1 PE=1 SV=1 |
| A0A1E3PQA5_9ASCO | 37.10% | 593 | 1e-92 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_12406 PE=4 SV=1 |
| Q6C4K1_YARLI | 37.89% | 388 | 1e-68 | YALI0E26081p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E26081g PE=4 SV=1 |
| A0A1E4TIT7_9ASCO | 38.22% | 382 | 3e-69 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_15536 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0158
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
632
Detailed signature matches
-
-
-
SSF48403 (Ankyrin r...)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04939_1 MFSEEKKIKINTNDLYAFDISSRFSLRPFALNLQLETAHEESNKDSSKVQTDENNFAKPTCQYCGIIPTDNTDPDYVRHH YKRDYHRYNIRRKLHYQNPLTEDEFETLIGELDESISGSDSEKESLESSDNEDIDKVNVLIRKTGLLNTIVEDEEAVNKG TNKKNNNENIPFFLYQSPQFPEGKVVAFYKSLFDKKIVSPSSDDIESLSDEARMIKALDSLDNNGTSAIFMIGGGHFAGA IISHKRSNQKPTPSSPYADIQILAQKSFHRYTTRRKQGGSQSANDNSKGKANSAGSTLRRYNEAALEKEIRELLQEWGNS YLKNVSAIYIRANGRSSRQILMNYANSPITSNDPRIKSLPFTTKRATANELKRSWWELTHGKLIDKPKAIIEDKKQVELK KISISSNPNAKKNDFPENPMEKHSLELSTLIKKSKVPSLIAYLRKHKLSASDFRLVPSDSLEFIHTPTLLHYASLKGTPT MITTLLKTLKADPTVKNSQGKTPYQISSDKSIQEAFQICRFTMGETVGWDWDNDAHVGPPLSKEEAKLRELEEKRLESEH NRNTLLEVQRQEMEKQKKSTKEKRSNGGHLGTIGVSSLSSTEALLSQLSTEDRRKYEREQRARAIEMRLNKK
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.