Protein
MCA_04916_1
Length
810 amino acids
Gene name: EDC3
Description: Enhancer of mRNA-decapping protein 3
Browser: contigC:4418042-4420559-
RNA-seq: read pairs 2125, FPKM 32.4, percentile rank 54.8% (100% = highest expression)
Protein function
| Annotation: | EDC3 | Enhancer of mRNA-decapping protein 3 | |
|---|---|---|---|
| KEGG: | K12615 | EDC3 | enhancer of mRNA-decapping protein 3 |
| EGGNOG: | 0PH7E | EDC3 | domain-containing protein |
| SGD closest match: | S000000741 | EDC3 | Enhancer of mRNA-decapping protein 3 |
| CGD closest match: | CAL0000174840 | EDC3 | Edc3p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04201_1 | 76.39% | 305 | 2e-150 | MIA_04201_1 |
| A0A0J9X7K7_GEOCN | 67.11% | 301 | 8e-117 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA04s05994g PE=4 SV=1 |
| UniRef50_A0A0J9X7K7 | 67.11% | 301 | 2e-113 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X7K7_GEOCN |
| A0A1E3PDL5_9ASCO | 56.58% | 281 | 4e-92 | YjeF N-terminal domain-like protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_7371 PE=4 SV=1 |
| A0A167FGS8_9ASCO | 52.80% | 286 | 4e-84 | Edc3p OS=Sugiyamaella lignohabitans GN=EDC3 PE=4 SV=1 |
| A0A060T2X8_BLAAD | 45.20% | 281 | 1e-62 | ARAD1A04378p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A04378g PE=4 SV=1 |
| A0A1D8PM93_CANAL | 37.67% | 300 | 5e-42 | Edc3p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=EDC3 PE=4 SV=1 |
| A0A1E4TKD9_9ASCO | 33.99% | 306 | 5e-35 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_784 PE=4 SV=1 |
| EDC3_YEAST | 30.74% | 283 | 5e-29 | Enhancer of mRNA-decapping protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EDC3 PE=1 SV=1 |
| Q6C942_YARLI | 42.11% | 76 | 2e-08 | YALI0D14410p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D14410g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0519
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
700
810
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd00600 (Sm_like)
-
mobidb-lite (disord...)
Residue annotation
-
heptamer interface...
-
Sm1 motif cd00600
-
hexamer interface ...
-
RNA binding site c...
-
Sm2 motif cd00600
Protein sequence
>MCA_04916_1 MSQFKNLTVKVSLNDGNTIQGIVKDVEQGQLLLSQVTFLDTGTKIGVFSVRGDQVRDLVVQNAKSDKESKDSENVNTPPT ASISNSQFPSTEQLSYHNNIPVNNSETPVIQHPVPTYIHPSNLFLPTPTPPQNYFPDSSSISPQPQIQQQQPSSQPTEIF HDPAILSAIPLNQTSQTASQNGPKLANYPPILPPQPQQYVEQPGLSQPQLEDDSNDSDDSIDPNPYTADVNLEEEEKAQH QHKFYLNNRNYPSNDSSFNPYNGTYYNDVSDSNFETDSMAPHSSRTLHKKPTNSMYRNNYYHSADSSIKGKAKERSSSKS KRKSKKKALPGSLKNDGHYADLHHPVSGRHSSKSTKGNGKHYHSRVDSHNGFESDGWATEDVAYFKDTEFDFQANLDRFN KESVFDELRQKDQVSPGDRLVAHNKIKPPAIAKYGNREMVIQHDEKSRWQDFSQEEEEEEQSRNEEEDEEEEEEDDDDDD DEDDEDDDYDEDDSSIISSFSALFTSSPPSPPSVRRPARTQIQFVDTNSGKVVPCASPVQMVELERLTSETFGISESILT ENAGRGVARLSLQSLGGISRFCYGNHNSRPLVVVFAGNTRAGARALAAARHLANRQVRIVALVIGCEDDQTQQRPVADQI NPQVKAQIKALKSCRGKVVKRYEQMISDINLIDSPPELIIDGLQGYQTTLDDLWEDDITTVISSIEWANRQKAGIVSLDI PSGIDSATGMPNAHNTKWPHMKSRWVLSCGLPLTGIQNAYLTGTVSKGDWSHYVVDVGFPRSALQKGPLRRFGQIWFGAE WLQQLEVVQK
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.