Protein
MCA_04842_1
Length
453 amino acids
Gene name: REI1
Description: Cytoplasmic 60S subunit biogenesis factor REI1; Zinc finger C2H2-type protein
Browser: contigC:4225173-4226535+
RNA-seq: read pairs 3152, FPKM 85.8, percentile rank 76.4% (100% = highest expression)
Protein function
| Annotation: | REI1 | Cytoplasmic 60S subunit biogenesis factor REI1; Zinc finger C2H2-type protein | |
|---|---|---|---|
| KEGG: | K14816 | REI1 | pre-60S factor REI1 |
| EGGNOG: | 0PKUG | PGUG_01936 | C2H2 finger domain protein |
| SGD closest match: | S000000471 | REI1 | Cytoplasmic 60S subunit biogenesis factor REI1 |
| CGD closest match: | CAL0000177865 | REI1 | Rei1p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04849_1 | 53.71% | 458 | 1e-134 | MIA_04849_1 |
| A0A0J9X502_GEOCN | 50.11% | 473 | 4e-119 | Similar to Saccharomyces cerevisiae YLR387C REH1 Cytoplasmic 60S subunit biogenesis factorr, associates with pre-60S particles OS=Geotrichum candidum GN=BN980_GECA02s08392g PE=4 SV=1 |
| A0A1E3PR19_9ASCO | 43.79% | 459 | 2e-81 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_80990 PE=4 SV=1 |
| A0A060T175_BLAAD | 47.53% | 263 | 1e-65 | ARAD1C22220p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C22220g PE=4 SV=1 |
| UniRef50_A0A060T175 | 47.53% | 263 | 3e-62 | ARAD1C22220p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T175_BLAAD |
| A0A167FUH2_9ASCO | 46.44% | 267 | 2e-61 | Rei1p OS=Sugiyamaella lignohabitans GN=REI1 PE=4 SV=1 |
| Q6CFB1_YARLI | 39.23% | 311 | 4e-49 | YALI0B08734p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B08734g PE=4 SV=1 |
| REI1_YEAST | 40.30% | 268 | 2e-47 | Cytoplasmic 60S subunit biogenesis factor REI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REI1 PE=1 SV=3 |
| A0A1D8PDH5_CANAL | 42.96% | 270 | 2e-46 | Rei1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=REI1 PE=4 SV=1 |
| A0A1E4THR6_9ASCO | 34.35% | 262 | 5e-41 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_122141 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1902
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
453
Detailed signature matches
-
-
PS00028 (ZINC_FINGE...)
-
no IPR
Unintegrated signatures
-
-
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PF12756 (zf-C2H2_2)
-
mobidb-lite (disord...)
Protein sequence
>MCA_04842_1 MEISVSRGVSSNGVPLYTCNTCGLSFPTTDLQRLHMKTEWHRYNLKRRVAQLPPISAEVFSEKILEQQAQQKLEEESARS SKNGKPKSQNRQKTKKDLRLEEKERRRQAAAQVSEHILRQKSKNSSARSPSVDSTSAVSSTFSLGDPVHHENTDDESLQD FSDAETKSIATETETEDIDEDSDEELDDVERHIKQKLARNKPIPPTHCFMTDKEFPSVEENAAHLFKEYGMFIPEREYLK DLEGLMTYLGEKIGLGNMCLYCNFEARTLEAVRAHMLAKGHLKIPYETMDQKLEISDFYDFRSSYKKPSSSSSTTEDADT TMKEGDGDDDDWEDEEVEDGEEYDDDEEIPEDYGVVTEHGLELALGNLRAGHRSMARYYKQNLYKPTIPEGQGTLVAADQ RLNTNMVKSTDSVEVKKAKKIALRQQRKIQDQERRRELKTINFQTHYRDQLLQ
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.