MCA_04816_1

Browser: contigC:4149484-4155108-

RNA-seq: read pairs 11, FPKM 0.1, percentile rank 3.0% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0038

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   1,865 - 1,866

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   22 - 1,844

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   15 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   3 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TRANSMEMBRANE (Tran...)
   1,845 - 1,864

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
9. mobidb-lite (disord...)
   1,290 - 1,329

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,164 - 1,188

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   783 - 810

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   701 - 771

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,407 - 1,835

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,042 - 1,079

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   635 - 688

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   936 - 971

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   278 - 572

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_04816_1
MKVLPAVLIALGSFQIKGSSASPLIKDTLHTNDSVLPTKQKSKLINHSGHDLVFRQSTEDYVPLPEGDRCLFPMKNSLTA
CSNFCYLVHRDAAINNAIVDNSFCVPKNASPDSKPKPGERYKRSYNNLVTACLACAEVYDNESAIKLREMSKECTVPVLE
VPECTERCINPEGTAARYLDPATCEEECTKFITDFGPMYVRDGPSNYCWGVMLNPVQINAGFINDLTSLVSNCDLVNTDA
YWMNICLLPTSTTKTTSTNTVSTSTTSITLSSSDISSTTELSSSDALSSTGISTSKVSTTTETSTSDLSSTTNTSTSNVS
PATGTSTSDVLSTTELSSSDISSTTKASTTISTSTTETSNSAVLSTRETSTSDVSSTGKAQTSDASSTTETSTSDTLSTT
KTSSSGVSSTTETSTPVVSSTTETSTSDESSTSELSSSDISSTTKASTTISTSTTETSNSEVSSTTELSISNVSSDMEPS
TLDMLSSTESSTSDLSSSTEILTSDASSDTATSHSNISSSSDLLTSDIPSETEFSTSDILSTTGTSTSDASSITESSTSK
VLSTTETPTSNISITKTSTMNVSTTTKISTSDVWSSTELSPLSSSTNISTLEVSTSIETSTSDVSSTTALSTSEVSTTTD
FLISDESSTTELSPSKISSSTEIFSSNISSSTESSTSDLSSTTKASTSNVSLTTELSSSKILSLPESSSSDSLSSTNIMT
SDSSDTATTQSDISSSTDMLTSDIPSATDLSTLNTSSATKSSTKINTSTTKISSSEVSSTTKLFSSDRSSSTTETSISNI
SSFPESSSDLSFSTDILTSGTSFDTHLSTSEISSTTETLISDPSSSTTSPTHSPLFTIDECKPYCAYVNQQINLISNPEQ
KCGILDSIDEQLVANCLRCVGQYLELYKPGEPAKTVFDSIIECNIPPSQKDYDPIPIPGHSTWSSGAGAGSGSGTATHTG
TTTPNPTQPPYTKEQCNRYCEYLSDQLDKSNDDSQKCAVLQSPNHQFVENCLRCTESYPELTEPLQPGKKVIDQLDRCQI
PKPGGPYEQVPLPGEGSQLPTDTTSPSKTTSSQTLPTDGLLPPQNKCSIYCLYIARQLELSPLLQQCSTLEGIEEQIIAN
CFRCQEIYEPVAVSEPVKKVNEAFEKCKLNPSDKPYQEVDIVQKPSQSTGGQSATTSQNGGSTDSTDMSVSVTTFLTRTS
IPSSSSTNDPPFTIEQCNPYCVYINDQISKFTDQDQQCRVLDAIDEQLVANCLRCVGTYLELYSPGQPAKNVFDELIACQ
IDPSKKEYDPVPIPGDVSITQSGTASSTADSISSATSQSVGQSPTDDSFTKEQCSIYCIYISRQLELSPSPAQYCSTLQN
IDDQIIANCFRCTEKYNEVAVSPSVRKVIETFNGCSLAPSQMPYKEVPIKDWPQDSTSMPSNQSTSKLSTSREDQETKSA
TALPSSSSKTTTDKPSASSPGSGLGSGSDGSGSGSGSDGSGSGSGSGSGSGSGSGSGSGSGSGSGSDSDSDSGLAPGSSN
PRPGSGSGSGSGSEPGSGSGSGSGPGSGSGSGSGSGSGSDSGLGPGSTNPGFGSGSNGSGSNGSGSGSDGSDGPGSGLGP
AATDPGSGSDGSGSDGSDAGLGSGSGSGSGSGFSSDGSGGSGSDSGLEPGSTNPGFGSGSGAGSGSGSGSGSGSGSGSGS
GSGSGSGSGSDSDSDGSGSGSGSGGSGSGSGSNGSGSDSGLGPGSNGSGSGSGSDGSDGPGSGLGPGAAGPGSGSNGSGS
GSGSNGLGSGSGFGSGSDSSGSGSGSGSDGAGSGLGSGTTGPGSSLDGSESGSGFKAGNDSGNGNFANLGPTNSSNNLNS
DQVNVGFRVPISSGLIISLLIISVTF

GO term prediction