Protein
MCA_04807_1
Length
685 amino acids
Browser: contigC:4103830-4105888+
RNA-seq: read pairs 1628, FPKM 29.3, percentile rank 52.1% (100% = highest expression)
Protein function
| EGGNOG: | 0PKV5 | PGUG_01939 | ribosomal large subunit biogenesis |
|---|---|---|---|
| SGD closest match: | S000002221 | SYO1 | Synchronized import protein 1 |
| CGD closest match: | CAL0000176600 | CAALFM_CR08500WA | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02948_1 | 42.40% | 658 | 9e-157 | MIA_02948_1 |
| A0A1E3PHF4_9ASCO | 27.30% | 696 | 1e-65 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_65992 PE=4 SV=1 |
| UniRef50_A0A1E3PHF4 | 27.30% | 696 | 3e-62 | Uncharacterized protein n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PHF4_9ASCO |
| A0A0J9YHG4_GEOCN | 29.57% | 656 | 2e-57 | Similar to Saccharomyces cerevisiae YDL063C SYO1 Transport adaptor or symportin, facilitates synchronized nuclear coimport of the two 5S-rRNA binding proteins Rpl5p and Rpl11p OS=Geotrichum candidum GN=BN980_GECA01s04135g PE=4 SV=1 |
| A0A060SZD0_BLAAD | 25.62% | 691 | 4e-56 | ARAD1C06512p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C06512g PE=4 SV=1 |
| A0A167FHB7_9ASCO | 25.51% | 682 | 4e-53 | Syo1p OS=Sugiyamaella lignohabitans GN=SYO1 PE=4 SV=1 |
| Q6C196_YARLI | 25.96% | 674 | 3e-49 | YALI0F18172p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F18172g PE=4 SV=1 |
| SYO1_YEAST | 23.10% | 723 | 5e-28 | Synchronized import protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SYO1 PE=1 SV=1 |
| Q5A345_CANAL | 26.94% | 271 | 1e-16 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR08500WA PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.8094
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
685
Detailed signature matches
-
-
SSF48371 (ARM repeat)
-
no IPR
Unintegrated signatures
Protein sequence
>MCA_04807_1 MGKAKKKSVSKARRTNFLPTAGRPVIKENPAVEAKVTLLVENLTSEDLMLRSGALSEITLLCDEAKYRSSFLKKKLVKIL LENFLNKEISDNNSLENIIEAYGLLRNICIEEGYDTTVFLWRQGLIDIIANTLKAIFSKDDQSIFSQQNAELLENILSLL SAMAVSNDEIFDDIQTKFGSDLPRCLVKIVQYYINSINNNTKQSSSSLFSIACEALYVFSQDVEQFIKEISSLDVVGILE NTSNYPILGVVYLNGVKYNMIHMSLLKRTETPTSISVHLLEILKSFKAFLSSVDLESVHNSVKEIQPDKQLSPQEIAASV KKSAENRTIVEGIQITVEIITAISETISVDPKKQDELIDKQRQMQKANVEDIVQTVEDEEGVIRKLKNNNPESSFDEMMM DDSVLFENNGGLEPIFKYLQSDIVVELAKLLSRREYTSRVTAAFNNIAWSFEANPTFVDSGESGWEVQSQELWKELLSHV GTPSEQGAQAFVEIESINSSIGALWGISSYYQNRNGHLPISLESVKYMISQSETISQLYPKEEATEHHIRLIGLFKSLSS QIIVNESDNEGIEKVALITQYLFKVIETVATKGSNSVNGVTETVVIESIYSLFEIFGDDEKQNFEDYNKKIYVNEGLNQE LKKLIPGLKNQFKRINKSKEFILKQRAAESLSNLESFIEYKESKK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005488 binding
Cellular Component
None predicted.