MCA_04792_1

Browser: contigC:4059709-4065340-

RNA-seq: read pairs 11, FPKM 0.1, percentile rank 3.0% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1720
Predicted cleavage: 12

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   22 - 1,876

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   12 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   3 - 11

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   424 - 475

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   352 - 385

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,590 - 1,850

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,319 - 1,353

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,210 - 1,243

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   508 - 533

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,106 - 1,134

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_04792_1
MRILSAILIALRSFQIKGTSASPLIQYQGYQDDSSAPTKQSKIINNYGHNLFPRQSTEGLVPLTDGKRCLFTLKNSKTAC
ANYCKLVLDNAKPNEAIVNNSFCVPKNANPNSNPKPGERYKTGYYNNLVGPCLACATAYDNASAIKMRDMSKECTTPLFT
LSKCGEQCIDPEGTAAQYLDPAKCKDNCIDYIAEFRRVYVKNSPSHYCWGLMMGQIQLNACKRCPKNSSFINDLNSLVSN
CDLANVNTYWMDICPLPTSTTTTTFTSTIITSTTKVASSSSEISTTTETSAIEVSSSTDNLSSVISSSTKHSSSQVLSTT
ELSDSDVSLSTELSTSTSDLSSDTESFVSQTLSSTDTLSSDESSTTELSTSDVSTTHELSTSDALSTTDIVASEISSNTN
PSTSDVSSSSETLLSEISNTELSSLEVSTTTKISTSETSSTTVPLTSDALSDTELSTSNTVASTETSTSDASFSSEISSS
EISSVLSTREISTNLSLTTEISISDELSSTSMPTLDVSSNTETSTSDVSSSGQTFSLELSSNTEFFTTEASSTTETLTSD
PLSSTELSTSSIFLTTNPSTSNTLSSTRILTSNVSFITELSSSDLSSDIESSTSQITSFTESLTSDASLTTETLISNAVS
TTDLPISDVSSTTELSISNISSITKLSTLELSSTIDPSASDASSDTKLFTSSVVLTIVTYISEISSSIELLTSDSLFATA
TLTSNISASTELSTSKVLSATEPSTSTILSTAELTSSDVSPTTKPFTSEVSTRIKTFTSGVSSTTETVTSDALTTTYILI
SDASSSTELSASDVSSSIEISNSDDAGSTAKTLTSNTLSNTEILASNKSYTTELSTLEVSNNTEISNSNVSPTTELPTSE
VSSIIETSDSDISNTTKLFTSNILSSTEISASEVSTITEIFTSDVLSTIEISNSDASTTTQMMASDSSSTVKLSASNLSP
PTKLFTSTVLYFTDMLTSDLSFTTGISTSEASSTTERSITEILSTTEALISDTSSSLALPTGLPLFTIDECKPYCAYVNK
QIDLISDSDQRCRVLSSINEQLVANCLRCVGQYLELYKPGEPAKTVFDSIIGCNISPSQKDYDPIPIPGHSTWSSGSGST
TYTDTTAPNPTQPPYTEEQCNKYCEYLSDQLDRSSDDSQKCAVLQSPNDQFVENCLRCTGSYPELTESSQAGKKVIDQLD
QCQIVKPDAPYEQVPLPGEGSQLPTDTISPSKTTSSQTLPTDGLLPPQNKCSINCLYITRQLELSSLLWQCSTLEGIEEQ
IIANCFRCQEIYEPVAVSEPVKKVNEAFKKCELNPSDKPYQDVDIIQRPRQSTNSQSVTTSQNGGSTHSTDEFAPVTTWS
TGVSISSSSPTNDPPFTIEQCNPYCVYINDQISRFTDQNQQCRVLDAIDEQLVANCLRCVRRYLELYSSGQPAKNVFDEL
IACQIASSKKEYDPVPIPGDVSITLSGTASSTADSISSVTSQLVGPRPTYDSFTNEQCNIYCIYISRQLELSPSSTQYCS
ILQSIDDQIIANCFRCTEKYSEVAVSPPVRKVIETFNSCNLAPSQKLYKEVPIKDWPQDFTSFPVEHSISRDSTSAENQG
TVSATALPSSSSKDSTNKPSPSIPGPGSGSDGSGSDSELASTNPGSGSGSDAFGFSFDGSGSGSGSGPGSGSGFGSNFGS
GSTGPESESKSEPGSGSFGSGSDGAGSGSGFESGSGATVPGSGSGSGSDGSDGSDGSGSDFGSGFGSTGLQPEFGSGSFG
SGSDGAGSGSGFESESDGSVLESDSGSDSNDSGFGFGSESGSDGSGLSGSSFGSGSSSGSGSGFGFEASNNNATENIVNH
GSTDGSNNSNGKKNAGFKISMSLDLSISLLIISTIF

GO term prediction