MCA_04777_1
Gene name: SEF1
Description: putative transcription factor with Zn(2)C6 fungal-type DNA-binding domain
Browser: contigC:4000141-4004156+
RNA-seq: read pairs 2671, FPKM 25.6, percentile rank 48.2% (100% = highest expression)
Protein function
| Annotation: | SEF1 | putative transcription factor with Zn(2)C6 fungal-type DNA-binding domain | |
|---|---|---|---|
| EGGNOG: | 0PHEI | SEF1 | suppressor protein sef1 |
| SGD closest match: | S000000162 | SEF1 | Putative transcription factor SEF1 |
| CGD closest match: | CAL0000189760 | SEF1 | Transcriptional regulatory protein SEF1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03679_1 | 83.90% | 584 | 0.0 | MIA_03679_1 |
| A0A0J9X914_GEOCN | 79.26% | 593 | 0.0 | Similar to Saccharomyces cerevisiae YBL066C SEF1 Putative transcription factor OS=Geotrichum candidum GN=BN980_GECA05s04784g PE=4 SV=1 |
| UniRef50_A0A0J9X914 | 79.26% | 593 | 0.0 | Similar to Saccharomyces cerevisiae YBL066C SEF1 Putative transcription factor n=2 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X914_GEOCN |
| A0A167F9U4_9ASCO | 65.55% | 508 | 0.0 | Sef1p OS=Sugiyamaella lignohabitans GN=SEF1 PE=4 SV=1 |
| A0A060T626_BLAAD | 68.53% | 429 | 0.0 | ARAD1C10494p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C10494g PE=4 SV=1 |
| A0A1E3PNL0_9ASCO | 63.97% | 458 | 0.0 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_7001 PE=4 SV=1 |
| SEF1_CANAL | 58.55% | 468 | 7e-174 | Transcriptional regulatory protein SEF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEF1 PE=1 SV=1 |
| SEF1_YEAST | 57.30% | 452 | 2e-161 | Putative transcription factor SEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEF1 PE=1 SV=4 |
| Q6CA85_YARLI | 54.78% | 418 | 3e-136 | YALI0D05005p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D05005g PE=4 SV=1 |
| A0A1E4TGX4_9ASCO | 29.63% | 216 | 7e-11 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_57386 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0127
Protein family membership
None predicted.
Domains and repeats
-
Domain
Detailed signature matches
no IPR
-
-
cd12148 (fungal_TF_MHR)
-
mobidb-lite (disord...)
Residue annotation
-
DNA binding site c...
-
Zn2+ binding site ...
Protein sequence
>MCA_04777_1 MESPKLCSALDPPHSSSSTSELTKSSKPPDSQPLKSPESDSLPKHRTEDSSATTSRSNPKKRAYSRTTNVAIQPSNKRQI SPSFTPSSITPLTNTSQQQPLMESLKPLSSLQNSSSDHKSDSLKSYLASFSRSSYDFDSKQQASSIIKKPPTILKSESPR LNPTSHHSEQECNTSKIAPLIAPKSPEQTNKNNKSVRRHSSAINFSHIESNAGSNKTLKRAGSFNTRNDGQTTNAGSKIA LLNSAAANNFHSMASPSPLPGGSTSPSLGAVGHSRPRPIRSCTHCRQQKIKCNALEVFPAPCTRCARTDRKCVVDPLFKP HKGGQVQSLRDDISHLKQQLAELQQRESILASVLEKTASTNPDAAAAAAAVFNSQNNPQNGDLTNQVGEDSNNQLKQLLQ ATIQAQNTTPSPSNHNNNSEFQLSSKSTVSPPITSGTTSSDTPSNSNKNTQINSAGLDSTNIDLNSNKSINSNISLSVRS KSTSPLVRNTSLPSSNSINSSNSAVHNNMGTHLPIRIKKESPKDTTSSNGDIYSRHTSVSTEHPDYVVGDVRLSYDQAEE LHQRFMTQYLPFLPIIQSNSAAELYQQSQLLFWTVCLTASLSEPTPTLYNSLCSLIKQLAIETCWIQTPRSTHIVQALLI LGNWPLPNEKVLDDCSYRFITLAKSLAMQLGLHRGKFIYEFSRTQVSLPDAEKWRTRTWIAIFFMEQVWCANLGLPPNMP MDYLLEVSRTDTSLPQSFRSLACLAMFCSKLVNLMGSSVTSPDGTLEPKNRFSTLGILEQELDRLVGELGTDNVFVEIYS LYLKMMICVFSFLPETPIQDQTIYIIKAYHAATRVVTLVSGLAEKRRIIEYPIYIRHPVSLAAFILFRLHLSPLLLPQYV ESARQSVVTVHRLFRNMLTAWKDVQNDISRTAKVLEKLNFVIITHPELFTKAPGIVTRMRSHLTASLFYELIWAIHEARR RGGIGSSSTHAAQFVAAAAAAAAAQAGMNNNGTNNNNNGNTNNNNNNNNSNNPLGNLSQFSFNTINSMPGSHVDSVPPLP FYNQITKDDFTTTTTTTPNGTTVTTLVPTHSNISYQNNNEGKVIGDYNNGPDGSMVNTTPLAGLGDPSTMLATGGPDAAG TIEIDNTVSEKTMSQNDNNNNSTTNQNNNNNNSNNQDTGNNNYNNNNKPVSDMSQQILQQLLHQHQQIQQQKQVGGNFST QQSETIDTSNIPIPMYSQNQVNQQRQDLPPPQQQQQQQTAIAHANTPFYDTTGSSSDPLHLDTLIQGIDWMDTKGDDLLG WMDNLDFNF
GO term prediction
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Molecular Function
GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0003677 DNA binding
GO:0008270 zinc ion binding
Cellular Component
GO:0005634 nucleus