Protein

MCA_04774_1

Length
417 amino acids

Gene name: IPI1

Description: Pre-rRNA-processing protein IPI1

Browser: contigC:3995520-3996836-

RNA-seq: read pairs 813, FPKM 24.0, percentile rank 46.5% (100% = highest expression)

Protein function

Annotation:IPI1Pre-rRNA-processing protein IPI1
KEGG:K14827IPI1 pre-rRNA-processing protein IPI1
EGGNOG:0PK3FIPI1Pre-rRNA-processing protein IPI1
SGD closest match:S000001127IPI1Pre-rRNA-processing protein IPI1
CGD closest match:CAL0000179551IPI1Pre-rRNA-processing protein IPI1-1

Protein alignments

%idAln lengthE-value
MIA_00474_135.27%4144e-59MIA_00474_1
A0A0J9XCI6_GEOCN32.93%4104e-40Similar to Saccharomyces cerevisiae YHR085W IPI1 Component of the Rix1 complex (Rix1p-Ipi1p-Ipi3p) and possibly pre-replicative complexes (Pre-RCs) OS=Geotrichum candidum GN=BN980_GECA09s03464g PE=4 SV=1
UniRef50_A0A0J9XCI632.93%4107e-37Similar to Saccharomyces cerevisiae YHR085W IPI1 Component of the Rix1 complex (Rix1p-Ipi1p-Ipi3p) and possibly pre-replicative complexes (Pre-RCs) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XCI6_GEOCN
A0A167FXC2_9ASCO33.45%2842e-32Ipi1p OS=Sugiyamaella lignohabitans GN=IPI1 PE=4 SV=1
A0A1E3PRP5_9ASCO29.19%3223e-28Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_30284 PE=4 SV=1
A0A060TGP2_BLAAD27.08%3841e-26ARAD1D24926p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D24926g PE=4 SV=1
Q6CHC5_YARLI27.64%4451e-23YALI0A10252p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A10252g PE=4 SV=1
IPI1_CANAL25.18%4131e-22Pre-rRNA-processing protein IPI1-1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=IPI1 PE=3 SV=2
IPI1_YEAST21.99%3914e-14Pre-rRNA-processing protein IPI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IPI1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0242

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 417

Detailed signature matches

  1. Family IPR024679
    Pre-rRNA-processing protein IPI1/Testis-expressed sequence 10 protein
    1. PF12333 (Ipi1_N)
  2. Domain IPR016024
    Armadillo-type fold
    1. SSF48371 (ARM repeat)
  3. Domain IPR011989
    Armadillo-like helical
    1. G3DSA:1.25.10.10
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. TRANSMEMBRANE (Tran...)

Protein sequence

>MCA_04774_1
MGSSKKKKEKKSDFIKTKLKVGKAKAKASNFTDTSFKSKTITLPNQSIVKDDQSVTHYLSLLNHSSNSTRREAVNFIRTR
FIEPNTVENEDGSKSIDYKPIVIASCSHLSDISKSVRASVVKLLNALPVSVLEAHAAAIVLYIHLSMTHIDPDVRISSTQ
ALDILVEKVPEQVCRVGFAKTLSCFITLLGWQRLLETMQKSRNSGMISDIQAAMSNSGIMSTTTTLEKSQDANKNKSNHI
KSLLMLLQAGLKGSESEEKSAKTVYYEEISDSESDLNSDDIIATRQPEKYYNPDNISFKFLVPHTSMPYLSLNLYEEDSG
DVVFISEHKTSNHETDDEDLDERAVKLRSGKGSSEVRPTEKVFEASKAAITEDVDSRRLLVDYYRPVFMEGLKSSLKEGG
ELGRFSKQALELLTNLS

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005488 binding

Cellular Component

None predicted.