Protein

MCA_04758_1

Length
647 amino acids


Description: Rab5 GDP/GTP exchange factor, VPS9-like protein

Browser: contigC:3961624-3963638-

RNA-seq: read pairs 1745, FPKM 33.3, percentile rank 55.5% (100% = highest expression)

Protein function

Annotation:Rab5 GDP/GTP exchange factor, VPS9-like protein
KEGG:K20131RABGEF1 Rab5 GDP/GTP exchange factor
EGGNOG:0PIQFPGUG_02060Guanine nucleotide exchange factor Vps9
SGD closest match:S000004563VPS9Vacuolar protein sorting-associated protein 9
CGD closest match:CAL0000186676orf19.5533Guanine nucleotide exchange factor

Protein alignments

%idAln lengthE-value
MIA_03704_159.47%5700.0MIA_03704_1
A0A0J9XDD2_GEOCN61.82%4950.0Similar to Saccharomyces cerevisiae YML097C VPS9 A guanine nucleotide exchange factor involved in vesicle-mediated vacuolar protein transport OS=Geotrichum candidum GN=BN980_GECA10s02320g PE=4 SV=1
A0A060T504_BLAAD57.82%4860.0ARAD1C07546p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C07546g PE=4 SV=1
UniRef50_A0A060T50457.82%4860.0ARAD1C07546p n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A060T504_BLAAD
A0A167D7Q7_9ASCO53.45%5222e-173Guanine nucleotide exchange factor VPS9 OS=Sugiyamaella lignohabitans GN=VPS9 PE=4 SV=1
Q6C3S0_YARLI49.42%5182e-153YALI0E32593p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E32593g PE=4 SV=1
A0A1E3PNR8_9ASCO47.27%4953e-141Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13253 PE=4 SV=1
A0A1E4TAI8_9ASCO44.22%4935e-126Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3386 PE=4 SV=1
A0A1D8PPY0_CANAL44.44%2794e-73Guanine nucleotide exchange factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5533 PE=4 SV=1
VPS9_YEAST46.15%2604e-70Vacuolar protein sorting-associated protein 9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS9 PE=1 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0023

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 647

Detailed signature matches

    1. PF02204 (VPS9)
    2. PS51205 (VPS9)
    3. SM00167 (vps9_2)
    1. SSF46934 (UBA-like)
    1. PS51140 (CUE)
    2. PF02845 (CUE)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF109993 (VPS9 domain)
  2. cd14369 (CUE_VPS9_like)
  3. mobidb-lite (disord...)

Residue annotation

  1. polypeptide substr...

Protein sequence

>MCA_04758_1
MSLLDHDDADIPTSQNDVQTPFTTALIPELATPATSGSSLKQDVSSLQPESKRTATTATPSESSSTIENTTTASSNPSPS
SSAAMKGILDEFDPLATRNKSTPKPEESSSKNPEDLIPSEKQSTNVAEKKESSKAKTKSKSSSKPNDQQQDAPMNEKQPS
SSSTPKDPSAPPPFDFQRFLDLLRHKSADPIARYLKSFLQEFNKRVWTADEQVKIITDFEHFIAGKMDQHPPFSTLSDAE
MDNAMEGMEKLIMNRLYTKTFSPEIPPNKRTDSHEEDVIRDTVLDDKMSLWKWIEGRHLDIPNKFLRNGEAFVKLASDEL
RKINHYRAPRDKVVCILNCCKVIFGLLRQSSSEENADGFLPILIYVVIKAHPKNMISNMNYIQRFRRPEKLNGEAGYYLS
SLQGAVSFIETLDHQSLSISDEEFNKNMDAAISEQKKQKEQQEQERLAQESSQPPITPIRGLTPEPGARTGTGSPRTASG
NLTPSAVLQSSAGLLAAPLKSISKLFDQTASNTRSNDSSNSGSPVISGQTRTFESQDYAARQEQLSSRKNNDKEDKELMD
ALYKSLDNGNNANSNAPKLSPEELAARQISAEEEEARRISQQEFESVVETLSQMFPTLDRNVIVDVATEKQGRVGAAVDS
CLALVST

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.