Protein
MCA_04695_1
Length
344 amino acids
Gene name: MRPL17
Description: 54S ribosomal protein L17, mitochondrial
Browser: contigC:3748084-3749199+
RNA-seq: read pairs 3146, FPKM 112.7, percentile rank 80.7% (100% = highest expression)
Protein function
| Annotation: | MRPL17 | 54S ribosomal protein L17, mitochondrial | |
|---|---|---|---|
| KEGG: | K17427 | MRPL46 | large subunit ribosomal protein L46 |
| EGGNOG: | 0PMZF | MRPL17 | mitochondrial 54S ribosomal protein YmL17 YmL30 |
| SGD closest match: | S000005196 | MRPL17 | 54S ribosomal protein L17, mitochondrial |
| CGD closest match: | CAL0000181825 | orf19.585 | Mitochondrial 54S ribosomal protein YmL17/YmL30 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01831_1 | 57.82% | 294 | 6e-115 | MIA_01831_1 |
| A0A0J9XIE1_GEOCN | 52.19% | 297 | 9e-101 | Similar to Saccharomyces cerevisiae YNL252C MRPL17 Mitochondrial ribosomal protein of the large subunit OS=Geotrichum candidum GN=BN980_GECA16s02100g PE=4 SV=1 |
| UniRef50_A0A0J9XIE1 | 52.19% | 297 | 2e-97 | Similar to Saccharomyces cerevisiae YNL252C MRPL17 Mitochondrial ribosomal protein of the large subunit n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XIE1_GEOCN |
| A0A060T7U0_BLAAD | 54.17% | 288 | 3e-100 | ARAD1D02200p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D02200g PE=4 SV=1 |
| A0A167E0M2_9ASCO | 53.17% | 284 | 5e-93 | Mitochondrial 54S ribosomal protein YmL17/YmL30 OS=Sugiyamaella lignohabitans GN=MRPL17 PE=4 SV=1 |
| A0A1E3PL05_9ASCO | 43.21% | 287 | 3e-69 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_46647 PE=4 SV=1 |
| RM17_YEAST | 37.54% | 293 | 8e-66 | 54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL17 PE=1 SV=2 |
| Q6C4P3_YARLI | 38.95% | 285 | 2e-60 | YALI0E24805p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E24805g PE=4 SV=1 |
| Q59X93_CANAL | 40.42% | 287 | 3e-57 | Mitochondrial 54S ribosomal protein YmL17/YmL30 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.585 PE=4 SV=1 |
| A0A1E4TK10_9ASCO | 37.63% | 287 | 7e-55 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_706 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9083
Predicted cleavage: 23
Protein family membership
- Ribosomal protein L46 (IPR021757)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF11788 (MRP-L46)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04695_1 MISLKHIKPSVASIQRSATRLYSTAAAAATSTESSNPSSSEISAEAQKNLKSAHNPPPNVYASLILSRIPIVTPERSEFE KAYYYYQSQLERRLMWTFPSYFYFKKGSLPERKFVAAQTGPVHRQPGVWYPKGIPDVKFNRERRTAQDLNIPRQSAAEAA SAGGAANDNAQGGFGAAAPIVPNPRKTKADETGDITSLTRKLDRTLYLLISEDGKTWKFPTTGIVPKEPLHDAAIRGLET LGGVDMHTWTVSNTPCAVVRYQDDKRQSIINEQQFSIEEDNDSILEKLSALTKSREYMIKAHIIHGTFVPQTKGLQFSWL SKEEIKEKVTPEYWDQVEVLLSNQ
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.