MCA_04691_1

Browser: contigC:3739905-3741030+

RNA-seq: read pairs 3, FPKM 0.1, percentile rank 3.5% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.6407

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   373 - 374

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   18 - 347

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 17

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   13 - 17

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   2 - 12

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 1

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 17

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TMhelix
   350 - 372

   TMHMM
   TMhelix (TMhelix)
9. TRANSMEMBRANE (Tran...)
   348 - 372

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
10. mobidb-lite (disord...)
    248 - 275

    MobiDB Lite
    mobidb-lite (disorder_prediction)

    289 - 328

    MobiDB Lite
    mobidb-lite (disorder_prediction)

Protein sequence

>MCA_04691_1
MLLSKIVFSTLLSTICCKDLIGIGKILAYDAKEKLLLGQAFLSPENKLVIGESNDHFIKADIVPVTFQMDHDGLLESFIA
LDHRGKYKRSLDLLEQTPKDNDTIANLLNINLFFKTKGTFTLTFKTDIENFWDQLSGIEISNNADTDTSNTFTITETVTS
TRFDKPSDSSLIVGPKTILETKSETSSVSASDISSEIIPTVTSINKSETSLVSADDISSEVIPTVTSITTSTIISEIIPT
VTSEITSTTTSEITPTTISEVIPTTTSETSSNTTSVQKTAINELLSTLPKAGPSKLSRSSRSRLTQTTQSSQWPQDSSSS
ISISQPEKYTTPSFSNGARCITGNLSQFIAFATHIYTPYGFIFLIIFLTNFLTY

GO term prediction