MCA_04690_1

Browser: contigC:3738755-3739448+

RNA-seq: read pairs 61, FPKM 3.3, percentile rank 14.2% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1290

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   230 - 230

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   20 - 209

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 19

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   15 - 19

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   3 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 19

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TRANSMEMBRANE (Tran...)
   210 - 229

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

Protein sequence

>MCA_04690_1
MNLFNLLSSIFLTTSVALAQSDAIKEPRAFQLLAVLDLGNFKEGGIVGPVSVNLRGQLATLGTEPLFTGLLQDDGRVKVL
GTQSWLGFDETNDTVFTDVFEVGDKSNVFTIVNEQFLGVTEQDSKGDPNTSTFVAIRDPEDVFQYLIYNRRYAPKGVDGK
PILLRVFWENDEKPKIKGKSYQNLSKFLRSSPLGPSFLISGYDSASGGEALNSFSATINAILFVIVAILF

GO term prediction