MCA_04687_1

Browser: contigC:3732718-3733570+

RNA-seq: read pairs 40, FPKM 1.7, percentile rank 11.1% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1955

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   283 - 283

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   25 - 263

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 24

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   20 - 24

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   8 - 19

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 7

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 24

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TRANSMEMBRANE (Tran...)
   264 - 282

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
9. mobidb-lite (disord...)
   182 - 219

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   62 - 148

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_04687_1
MKFSSQPSSALLLLSALSYKVVTAQGVTSVASVGTTVSNAAVVNGATMENVNAVEVSNSIAINNGGDSENPPDVSGAAPT
VSPEPQPEGEADPSGAPADEGEAPQPEGEAIPEGEAMPEGEEVPEGAAPEGSELPENNASETAPDAEVPTDGALVSAVPI
SASVPAAGAEGTSITGEQISASVSAPQETSEFPNPNPAPIASSVSPVPENGGVPESVPPYPINGTASSSLVPVATAPLPT
LEQVPAAGNGTHSMLPQVNGASNIVISAGSVVLISILSSSLFL

GO term prediction