Protein
MCA_04656_1
Length
340 amino acids
Description: putative mediator of RNA polymerase II transcription subunit 9
Browser: contigC:3618841-3619864+
RNA-seq: read pairs 496, FPKM 18.0, percentile rank 38.4% (100% = highest expression)
Protein function
| Annotation: | putative mediator of RNA polymerase II transcription subunit 9 |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03932_1 | 49.12% | 228 | 4e-39 | MIA_03932_1 |
| A0A161HKG5_9ASCO | 38.71% | 93 | 5e-13 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_416 PE=4 SV=1 |
| UniRef50_A0A161HKG5 | 38.71% | 93 | 1e-09 | Uncharacterized protein n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A161HKG5_9ASCO |
| A0A060TF06_BLAAD | 36.07% | 122 | 2e-11 | ARAD1D18810p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D18810g PE=4 SV=1 |
| A0A0J9YH99_GEOCN | 47.37% | 114 | 1e-08 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA01s01297g PE=4 SV=1 |
| Q6BZS9_YARLI | 36.14% | 83 | 7e-08 | YALI0F31163p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F31163g PE=4 SV=2 |
| A0A1E3PRT5_9ASCO | 43.08% | 65 | 4e-08 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_14093 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0028
Protein family membership
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04656_1 MESFISIPPPNRPSNAPTPDVRRRDLSPNPSLIIGSNSEASPQQSHAGQPNFETEEDLRRNEAAVETLQQMDLWSLVLDL MARVQSGAVTAQNVDNEAGIIRARIARARASLKQISGLDISMAERKEEIFRLEEAIEKKKDLLLRFQAVMGATNIAQEQS KENNNDNNGNVDGNTNVKNDSDSNPTIKQEPQNNPINNQGDLMGSIDPISDFTGNNSTENKNINNNDMMVDLDDIMSDIN FMNQGNSSLNMDGNINSMSNPGSMTNIGQPTNSNMMSNNGDDMLNFDSSLKDISDDNINVNINNQQQQQQQQNMDSGNSM MQTDNAELASYLDDFDKFTF
GO term prediction
Biological Process
GO:0006357 regulation of transcription from RNA polymerase II promoter
Molecular Function
GO:0001104 RNA polymerase II transcription cofactor activity
Cellular Component
GO:0016592 mediator complex