Protein

MCA_04616_1

Length
253 amino acids

Description: Putative subunit of NADH dehydrogenase complex

Browser: contigC:3518517-3519279-

RNA-seq: read pairs 10225, FPKM 497.4, percentile rank 94.2% (100% = highest expression)

Protein function

Annotation:Putative subunit of NADH dehydrogenase complex
KEGG:K03943NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2 [EC:1.6.5.3 1.6.99.3]
EGGNOG:0PFVJNUHMNADH-ubiquinone oxidoreductase 24 kDa subunit
CGD closest match:CAL0000183480orf19.2091Uncharacterized protein

Protein alignments

%idAln lengthE-value
MIA_04354_182.05%2342e-145MIA_04354_1
A0A0J9X455_GEOCN84.23%2223e-142NUHM subunit of mitochondrial NADH:ubiquinone oxidoreductase (Complex I), putative OS=Geotrichum candidum GN=BN980_GECA02s06929g PE=4 SV=1
A0A161HL54_9ASCO80.18%2178e-134Subunit of NADH-ubiquinone oxidoreductase, mitochondrial, putative OS=Sugiyamaella lignohabitans GN=AWJ20_976 PE=4 SV=1
A0A060T2U0_BLAAD73.75%2404e-131ARAD1C31306p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C31306g PE=4 SV=1
UniRef50_H8WZ2272.57%2377e-121NADH dehydrogenase n=9 Tax=Opisthokonta TaxID=33154 RepID=H8WZ22_CANO9
F2Z6C0_YARLI66.40%2538e-123YALI0D00737p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D00737g PE=4 SV=1
A0A1D8PG37_CANAL76.36%2202e-122Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2091 PE=4 SV=1
A0A1E4TA64_9ASCO73.83%2141e-118Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32182 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.9951
Predicted cleavage: 18

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 253

Detailed signature matches

  1. Family IPR002023
    NADH-quinone oxidoreductase subunit E-like
    1. PIRSF000216 (NDH-1_E)
    2. TIGR01958
    3. cd03064 (TRX_Fd_NuoE)
    4. PS01099 (COMPLEX1_24K)
  2. Domain IPR012336
    Thioredoxin-like fold
    1. SSF52833 (Thioredox...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.40.30.10
  2. PF01257 (2Fe-2S_thi...)
  3. mobidb-lite (disord...)

Residue annotation

  1. putative dimer int...
  2. [2Fe-2S] cluster b...

Protein sequence

>MCA_04616_1
MIFNRLSSNAVRSAMRTPSLISSKRACQPILSQSRNSHIIAVHRDTKENNPSIPFEFTPENQERARNIIAKYPAQYKKGA
VMPLLDLGQRQLGFTSISVMNYVAKLLEMPPMRVYEVATFYTMYNRNPMGKYHLQVCTTTPCQLCGSDSIMKAVEEHLGI
HPGQTTKDGLFTLSEVECLGACVNAPMLAINDDYYEDLSAEGTKEILTKLQNGETVTPGPEHGKRKSCEPFSGQKVLLNP
EPYNVADFTRSDL

GO term prediction

Biological Process

GO:0055114 oxidation-reduction process

Molecular Function

GO:0016491 oxidoreductase activity

Cellular Component

None predicted.