Protein
MCA_04598_1
Length
213 amino acids
Browser: contigC:3472675-3473382-
RNA-seq: read pairs 606, FPKM 35.0, percentile rank 57.1% (100% = highest expression)
Protein function
| KEGG: | K12849 | PRPF38A | pre-mRNA-splicing factor 38A |
|---|---|---|---|
| EGGNOG: | 0PMVF | FG06411.1 | RNA binding protein |
| CGD closest match: | CAL0000195741 | FGR16 | U4/U6-U5 snRNP complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| Q6C616_YARLI | 63.10% | 187 | 1e-75 | YALI0E13299p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E13299g PE=4 SV=1 |
| UniRef50_Q6C616 | 63.10% | 187 | 3e-72 | YALI0E13299p n=28 Tax=Fungi TaxID=4751 RepID=Q6C616_YARLI |
| A0A060TAZ0_BLAAD | 61.08% | 185 | 1e-73 | ARAD1D30272p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D30272g PE=4 SV=1 |
| A0A161HMM8_9ASCO | 60.96% | 187 | 7e-71 | Pre-mRNA-splicing factor 38A OS=Sugiyamaella lignohabitans GN=AWJ20_2697 PE=4 SV=1 |
| A0A1E3PMG8_9ASCO | 60.00% | 185 | 6e-70 | PRP38-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82400 PE=4 SV=1 |
| MIA_01665_1 | 57.65% | 196 | 5e-66 | MIA_01665_1 |
| A0A0J9X5E2_GEOCN | 55.61% | 196 | 2e-56 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA03s00890g PE=4 SV=1 |
| Q59WJ8_CANAL | 40.66% | 182 | 2e-31 | U4/U6-U5 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=FGR16 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1292
Protein family membership
- Pre-mRNA-splicing factor 38 (IPR005037)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_04598_1 MASENSTETDRYITDRGLVHGASSIHNINPSLLIEKIIRERIYDSIFWKEKCTFIGDLLTFCDVVSEDLTYIGGTYGSNL KVTPFLCLLFKLIQLSPKWEIVKEFLHQKYFKYLTALAAMYIRLFARPKDVYLLLEPLLNDYRKLKYRQKNNEGVILIYM DTFVDDLLRKERVCDIALPRLTKRIVLEDDDQLEPRESSIQSELDDSSSNDES
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.