Protein
MCA_04590_1
Length
815 amino acids
Gene name: RRN3
Description: RNA polymerase I-specific transcription initiation factor RRN3
Browser: contigC:3454178-3456779+
RNA-seq: read pairs 3797, FPKM 57.5, percentile rank 68.4% (100% = highest expression)
Protein function
| Annotation: | RRN3 | RNA polymerase I-specific transcription initiation factor RRN3 | |
|---|---|---|---|
| KEGG: | K15216 | RRN3 | RNA polymerase I-specific transcription initiation factor RRN3 |
| EGGNOG: | 0PG3I | FG07086.1 | RNA polymerase I-specific transcription initiation factor RRN3 |
| SGD closest match: | S000001608 | RRN3 | RNA polymerase I-specific transcription initiation factor RRN3 |
| CGD closest match: | CAL0000198505 | RRN3 | rDNA-binding RNA polymerase I transcriptional factor |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01053_1 | 55.96% | 361 | 2e-125 | MIA_01053_1 |
| A0A161HIJ2_9ASCO | 48.21% | 363 | 9e-94 | Rrn3p OS=Sugiyamaella lignohabitans GN=RRN3 PE=4 SV=1 |
| UniRef50_A0A161HIJ2 | 48.21% | 363 | 3e-90 | Rrn3p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A161HIJ2_9ASCO |
| A0A0J9X5G7_GEOCN | 46.43% | 336 | 1e-93 | Similar to Saccharomyces cerevisiae YKL125W RRN3 Protein required for transcription of rDNA by RNA polymerase I OS=Geotrichum candidum GN=BN980_GECA03s01253g PE=4 SV=1 |
| A0A1E3PQC8_9ASCO | 42.64% | 333 | 3e-81 | RNA polymerase I-specific transcription initiation factor RRN3 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_22113 PE=4 SV=1 |
| A0A060SXC9_BLAAD | 39.83% | 349 | 5e-73 | ARAD1A12232p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A12232g PE=4 SV=1 |
| Q6C7M0_YARLI | 38.76% | 338 | 9e-70 | YALI0D26994p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D26994g PE=4 SV=2 |
| A0A1E4TDZ3_9ASCO | 38.46% | 338 | 8e-68 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_13745 PE=4 SV=1 |
| RRN3_YEAST | 35.85% | 357 | 3e-65 | RNA polymerase I-specific transcription initiation factor RRN3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRN3 PE=1 SV=1 |
| Q59L42_CANAL | 36.80% | 337 | 7e-65 | rDNA-binding RNA polymerase I transcriptional factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RRN3 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0519
Protein family membership
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
815
Detailed signature matches
-
-
PF05327 (RRN3)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_04590_1 MPTAVSFNIQSSKETPISSTSHQMNGYFPTPTGLAVKLKRKWDLSDEEEEEENNDTSSKSKLSHKKLKRTQSHITLNSSN NASNKSLLKTKSFSTPNSPPSSDDDILLSPPQNPSNTNSKSDSSKDEDEFHKSMFQAYVNSAIDNLDKKNYETINSISSR IRFNKSHPEAFSTGQLLIIISTLTNEVGRLDNLETNDLISSILSLDWLKMDSTFINAYIRFLTVLVSGVPRWWFDITQKM IRSFLTEENTSPQHIVIRHILKLMPTAVSSLQSIITNNFPHKNETKEITVNYVENLLKIIDYSPESRSSIWSLIFERILQ QDVELQDMIDSDDEEEEEDDEDQDDDDEDDSSDDDSDEDSDDGSLTPTHAENSNNLTGRIKIESESVADVANMIQSNVDS KEVDTVNGQQQQQHHQSDPEDEDEEEDGLHGMETLFDNDEFNYDVDGGINYFRLRNTLDSLITLLFEYIEKRLTSETILE ENGPAQVLFTILLSNFQNYILPTHRTRCVQFIIFRAAHAHPALLDAFLVSLIDIALSPIENMDRRLKAVEYISSFIARAR GLSRTKVLFVVSIFADWLKRYVEEREHEVDEDNGALGMGRFKIFYAVTQALMYMFCFHHEIMRANYNPSLKASSKQAADN TQRRNDLINGSLHADHEQEEILSLKTSADSEWECNLDRLFQRLIVSKFNPLKYCSDSVVSKFAQIALHENLAYCFTIMEQ NRLGRHRTASASISSSRSVSGQGTTSQSSSMFKLNLNKQFVMLDAVFPFDPLHLPVAKKMVDDIYNEWVSTEDSDSDDEE EEEEEEEIDDDDMSE
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.