Protein
MCA_04573_1
Length
265 amino acids
Gene name: SYF2
Description: Pre-mRNA-splicing factor SYF2
Browser: contigC:3413923-3414977-
RNA-seq: read pairs 922, FPKM 42.8, percentile rank 61.9% (100% = highest expression)
Protein function
| Annotation: | SYF2 | Pre-mRNA-splicing factor SYF2 | |
|---|---|---|---|
| KEGG: | K12868 | SYF2 | pre-mRNA-splicing factor SYF2 |
| EGGNOG: | 0PM31 | FG06739.1 | pre-mRNA-splicing factor SYF2 |
| CGD closest match: | CAL0000182244 | orf19.7139 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04618_1 | 63.47% | 219 | 2e-93 | MIA_04618_1 |
| A0A0J9X7U5_GEOCN | 52.53% | 217 | 6e-69 | Similar to Saccharomyces cerevisiae YGR129W SYF2 Member of the NineTeen Complex (NTC) OS=Geotrichum candidum GN=BN980_GECA05s03035g PE=4 SV=1 |
| UniRef50_A0A0J9X7U5 | 52.53% | 217 | 1e-65 | Similar to Saccharomyces cerevisiae YGR129W SYF2 Member of the NineTeen Complex (NTC) n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9X7U5_GEOCN |
| A0A1E3PT56_9ASCO | 50.69% | 217 | 2e-63 | SYF2-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_55328 PE=4 SV=1 |
| A0A060T5C2_BLAAD | 49.30% | 215 | 8e-59 | ARAD1C04378p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C04378g PE=4 SV=1 |
| SYF2_YARLI | 48.39% | 217 | 3e-48 | Pre-mRNA-splicing factor SYF2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SYF2 PE=3 SV=1 |
| A0A1E4TKK5_9ASCO | 32.24% | 214 | 3e-22 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_48054 PE=4 SV=1 |
| A0A161HIU9_9ASCO | 51.19% | 84 | 4e-22 | Splicing factor, SYF2 family OS=Sugiyamaella lignohabitans GN=AWJ20_3980 PE=4 SV=1 |
| A0A1D8PRK3_CANAL | 30.56% | 144 | 1e-06 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7139 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.3279
Protein family membership
- mRNA splicing factor SYF2 (IPR013260)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04573_1 MVSKELKPKATAKESNKIEESTSNASARSESSTSVKDRLQRLKELRKRKNDSIQDNRKEVHQEYTKKRTDHKLLANLERK KEKAEQELTKIELEEKGEDFDRRQAWDWTIEESEKWDEKMRAKKERIETSKFSDYSTAAERAYLKDLKDSQIDSDTYRKK KMELIKENATLIEGEDGNIIAYDSTGSLTNSAPIHPGPSKEAVDRLVNQLNKGDQQRMKRRKKNDDDQLVSYINEKNKQF NEKLSRHYDKYTSEIRDSIERGTAL
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.