MCA_04565_1

Browser: contigC:3397431-3399048-

RNA-seq: read pairs 86, FPKM 2.0, percentile rank 11.7% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1598

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   19 - 538

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 18

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   14 - 18

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   6 - 13

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 18

   SignalP euk
   SignalP-noTM (SignalP-noTM)

Protein sequence

>MCA_04565_1
MVKLNLVASLFLVTVVSSFPLYNSKVSSSPLIPYNNTNNSYNSNNNNKTPWIFASNNKNDDLSSSSSSANEILKKSKIIS
QIYKASISNYKSLVNQSSKEKEALDNFEVSIFGNDYVSKQDKHSLKWYIKRVFCNIIFKSIDTMNQQDNKNETPIQFIKR
FYFLVDSTPTKTLAYHLPYILTAGFNKALTEGLNIGIMYSKWYIDELFDAVMADEEFQLSAGIGTIMMAINSGIIIGKEL
QLERDFSYNGDRKMDIQNKNKDNKRPQAIYELAEMVLTVLGPVVTPSIAGTVTMAAVFASTPLVFERHVLNLVVIPQIID
QQVLKSFNNIKGFEIGRLVGTVNGNDNNNKEKYYQNGDLIKGVSRVLYNNNETTSKSSIITNKKEKTFEYGNYVYGTLKS
QLIGNFGFAVFEDDVIMINDNSNSQQQQQKEEASLSNNNRNVWKITTISGKTFYLKIVGNRGPIAMLTVEKETTATDGGE
FIKQIEHLTNDYHTNNNDNNEIIMNIKDINFERIEKDESDNNMKMKTMVKNINWSFEI

GO term prediction