Protein
MCA_04536_1
Length
449 amino acids
Gene name: SQT1
Description: Ribosome assembly protein SQT1
Browser: contigC:3308460-3309810-
RNA-seq: read pairs 2946, FPKM 80.9, percentile rank 75.4% (100% = highest expression)
Protein function
| Annotation: | SQT1 | Ribosome assembly protein SQT1 | |
|---|---|---|---|
| KEGG: | K14818 | SQT1 | ribosome assembly protein SQT1 |
| EGGNOG: | 0PJYK | PGUG_00512 | ribosome biogenesis protein Sqt1 |
| SGD closest match: | S000001451 | SQT1 | Ribosome assembly protein SQT1 |
| CGD closest match: | CAL0000180910 | orf19.4029 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04195_1 | 68.15% | 427 | 0.0 | MIA_04195_1 |
| A0A0J9X8I2_GEOCN | 52.56% | 449 | 3e-165 | Similar to Saccharomyces cerevisiae YIR012W SQT1 Essential protein involved in a late step of 60S ribosomal subunit assembly or modification OS=Geotrichum candidum GN=BN980_GECA05s02122g PE=4 SV=1 |
| A0A167CWT2_9ASCO | 48.90% | 362 | 2e-135 | Sqt1p OS=Sugiyamaella lignohabitans GN=SQT1 PE=4 SV=1 |
| UniRef50_A0A167CWT2 | 48.90% | 362 | 6e-132 | Sqt1p n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A167CWT2_9ASCO |
| A0A060T923_BLAAD | 46.44% | 379 | 3e-123 | ARAD1C34518p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C34518g PE=4 SV=1 |
| A0A1E3PU26_9ASCO | 44.47% | 389 | 3e-110 | Essential protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81414 PE=4 SV=1 |
| Q6CDC4_YARLI | 41.83% | 361 | 2e-99 | YALI0C01738p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C01738g PE=4 SV=1 |
| A0A1D8PP79_CANAL | 40.60% | 367 | 6e-98 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4029 PE=4 SV=1 |
| SQT1_YEAST | 33.77% | 382 | 7e-69 | Ribosome assembly protein SQT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SQT1 PE=1 SV=2 |
| A0A1E4TCE5_9ASCO | 35.11% | 356 | 1e-57 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_16384 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0136
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
-
Repeat
1
50
100
150
200
250
300
350
400
449
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04536_1 MSNQPKPTDTEEEIIVQGTEEGSYIDSSQIDEVIEDNDDLEDRMDLSDDDDDDNGEADFDPAEQYAPEDISQDLALQGHD IHVDENGDIVLDLSNTSIGHFDKHGKSIFIVASHPTLPMIMSGGEDEKAYLWTTNSQPPKLVAELDGQKESVVCGGFSPD GQYVVTGDMEGQVRVWRSVKRGQQWDFVGSFSEVDEVTWISFHPKQPVFAFGSREGAVWVVNLDDFSSISVLTNHTMTTN AGVFVNTDDMDSLTLITLADDGIISWNAYQGTTNYTLREKDLQAPYGWITCALSPSGKTLACGSPDGIIALIGVEKGNVL KRFENTQSDAVEEEARSVEAIAWAPVSNALVTGNVKGDITVYDVPSWKIRKTLPAKDAITSLQFIPGSNKLISSDMAGGL IKWDIMSGKELWKGQGHYDGILGFTIQNGGKRIITAGDQGVSMIFDTEE
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.