Protein
MCA_04523_1
Length
440 amino acids
Browser: contigC:3276452-3277775-
RNA-seq: read pairs 808, FPKM 22.6, percentile rank 44.8% (100% = highest expression)
Protein function
| EGGNOG: | 0PMBW | FG00370.1 | polyadenylation factor subunit CstF64 |
|---|---|---|---|
| SGD closest match: | S000003012 | RNA15 | mRNA 3'-end-processing protein RNA15 |
| CGD closest match: | CAL0000184168 | CAALFM_CR08900CA | Cleavage polyadenylation factor subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03403_1 | 65.56% | 90 | 8e-37 | MIA_03403_1 |
| A0A0J9XKA6_GEOCN | 55.56% | 90 | 1e-26 | Similar to Saccharomyces cerevisiae YGL044C RNA15 Component of the cleavage and polyadenylation factor I (CF I) OS=Geotrichum candidum GN=BN980_GECA32s02628g PE=4 SV=1 |
| UniRef50_A0A0J9XKA6 | 55.56% | 90 | 3e-23 | Similar to Saccharomyces cerevisiae YGL044C RNA15 Component of the cleavage and polyadenylation factor I (CF I) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XKA6_GEOCN |
| A0A1E3PEK9_9ASCO | 47.06% | 85 | 1e-21 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_27919 PE=4 SV=1 |
| A0A060TCJ0_BLAAD | 42.17% | 83 | 4e-19 | ARAD1D42812p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D42812g PE=4 SV=1 |
| A0A167CJL6_9ASCO | 41.98% | 81 | 6e-17 | Rna15p OS=Sugiyamaella lignohabitans GN=RNA15 PE=4 SV=1 |
| Q6C6I9_YARLI | 40.51% | 79 | 2e-16 | YALI0E09174p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E09174g PE=4 SV=1 |
| RNA15_YEAST | 33.71% | 89 | 4e-16 | mRNA 3'-end-processing protein RNA15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNA15 PE=1 SV=1 |
| A0A1D8PTU2_CANAL | 35.71% | 84 | 2e-10 | Cleavage polyadenylation factor subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR08900CA PE=4 SV=1 |
| A0A1E4TFM7_9ASCO | 34.25% | 73 | 3e-10 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2290 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2814
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
440
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04523_1 MNNHNVIKPPSRALFVGNIPYELTDEQVYQIMMSLGPVTKFHMVHDQKTNKSKGYCFVEYSTVEIATNAITTIRQIKIGN RSLRADFTKEFTGISVIPQSSQNQNNNNNGINNENINIPNMQMGFNPNMGRNQQNSNLLNNNDFNSNSSNFNGGGNQLNG MNKRGGKNNRWGNKKPLLPSHQSQQQQQQQQQQFPYQSKNSQGNQALENSNLTPSYQRTLRNFDPMSKILGKISPTQLLE FFTTIQPLVQNPDQVSSILQSHPDLAYASLQALMLMGFADANVLGTVTKNPNMPLNDIIALIKQNHPEAQASGVQVKEEP NNGFSQNVQHENKTQDFKNNRYQNNNEQYRSNSAGNNMKKNNFNNNNNNFSKKKGYGNDNNNNNFLQPVPIQQSPQTPAN VPNDQAAMLSQILQLSDEQINSLPAEQQAIIRNLKASYTS
GO term prediction
Biological Process
GO:0031124 mRNA 3'-end processing
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.