Protein
MCA_04508_1
Length
317 amino acids
Browser: contigC:3212313-3213465-
RNA-seq: read pairs 649, FPKM 25.2, percentile rank 47.8% (100% = highest expression)
Protein function
| KEGG: | K05956 | RABGGTB | geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60] |
|---|---|---|---|
| EGGNOG: | 0PGTA | FG07110.1 | Geranylgeranyltransferase beta subunit |
| SGD closest match: | S000006380 | BET2 | Geranylgeranyl transferase type-2 subunit beta |
| CGD closest match: | CAL0000186043 | BET2 | Rab geranylgeranyltransferase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01095_1 | 80.54% | 298 | 2e-172 | MIA_01095_1 |
| A0A0J9X589_GEOCN | 71.48% | 298 | 1e-154 | Similar to Saccharomyces cerevisiae YPR176C BET2 Beta subunit of Type II geranylgeranyltransferase required for vesicular transport between the endoplasmic reticulum and the Golgi OS=Geotrichum candidum GN=BN980_GECA02s03134g PE=4 SV=1 |
| A0A060T982_BLAAD | 64.55% | 299 | 6e-138 | ARAD1C35970p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C35970g PE=4 SV=1 |
| UniRef50_A0A162ZD33 | 61.99% | 292 | 4e-123 | Uncharacterized protein n=9 Tax=Opisthokonta TaxID=33154 RepID=A0A162ZD33_PHYB8 |
| PGTB2_YEAST | 55.84% | 308 | 2e-116 | Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BET2 PE=1 SV=3 |
| A0A1E3PFV2_9ASCO | 57.05% | 305 | 1e-115 | Terpenoid cyclases/Protein prenyltransferase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47503 PE=4 SV=1 |
| A0A1E4THF3_9ASCO | 54.37% | 309 | 2e-108 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2907 PE=4 SV=1 |
| Q6C4B4_YARLI | 60.16% | 256 | 1e-104 | YALI0E28248p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E28248g PE=4 SV=1 |
| A0A1D8PU24_CANAL | 49.84% | 321 | 8e-104 | Rab geranylgeranyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=BET2 PE=4 SV=1 |
| A0A161HKQ8_9ASCO | 65.48% | 197 | 2e-94 | Bet2p OS=Sugiyamaella lignohabitans GN=BET2 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0173
Protein family membership
- Geranylgeranyl transferase type-2 subunit beta (IPR026873)
Domains and repeats
-
Domain
-
Repeat
1
50
100
150
200
250
317
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
active site cavity...
-
peptide binding po...
-
lipid binding pock...
-
heterodimer interf...
-
Zn2+ binding site ...
Protein sequence
>MCA_04508_1 MGSEGSIAFEREKHIKYIQELDTKREDIEYWYTSHLRISGLYWGLNALDILNEKDKLPRQGVIDFVLSCQHPSGGFGANV KYDPHILYTLSAVQILLIEDALDLIDKDKVAEYVASMQLEDGSFQGDKYGEVDTRFVYSAIQTLRILGKLDMINTDKVVE WIQKCKNFDGGYGLGPGSESHSAQIWTCLGTLSILNRLDVVDVEPLSWWLAERQVANGGLNGRPEKLPDVCYSWWVLSSL AILKRTHWIDGEKLRSFILAAQDPEQGGIADREGDEVDVFHTVFGICGLSLLGYENLEPVDPSFCLTKKTLEKLPPL
GO term prediction
Biological Process
GO:0018344 protein geranylgeranylation
Molecular Function
GO:0003824 catalytic activity
GO:0004663 Rab geranylgeranyltransferase activity
Cellular Component
None predicted.