Protein
MCA_04491_1
Length
852 amino acids
Gene name: UTP13
Description: U3 small nucleolar RNA-associated protein 13
Browser: contigC:3167408-3170033-
RNA-seq: read pairs 1493, FPKM 21.6, percentile rank 43.4% (100% = highest expression)
Protein function
| Annotation: | UTP13 | U3 small nucleolar RNA-associated protein 13 | |
|---|---|---|---|
| KEGG: | K14555 | UTP13 | U3 small nucleolar RNA-associated protein 13 |
| EGGNOG: | 0PHWK | UTP13 | U3 small nucleolar RNA-associated protein |
| SGD closest match: | S000004212 | UTP13 | U3 small nucleolar RNA-associated protein 13 |
| CGD closest match: | CAL0000184822 | UTP13 | Utp13p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01182_1 | 56.17% | 851 | 0.0 | MIA_01182_1 |
| A0A0J9XCG9_GEOCN | 52.54% | 847 | 0.0 | Similar to Saccharomyces cerevisiae YLR222C UTP13 Nucleolar protein OS=Geotrichum candidum GN=BN980_GECA09s01451g PE=4 SV=1 |
| A0A1E3PG57_9ASCO | 47.65% | 852 | 0.0 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52731 PE=4 SV=1 |
| UniRef50_A0A1E3Q0K0 | 47.24% | 851 | 0.0 | Uncharacterized protein n=4 Tax=Saccharomycetales TaxID=4892 RepID=A0A1E3Q0K0_LIPST |
| A0A167FB38_9ASCO | 49.19% | 864 | 0.0 | Utp13p OS=Sugiyamaella lignohabitans GN=UTP13 PE=4 SV=1 |
| Q6C3U5_YARLI | 46.17% | 849 | 0.0 | YALI0E32043p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E32043g PE=4 SV=1 |
| A0A1E4TFG9_9ASCO | 44.59% | 841 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2248 PE=4 SV=1 |
| A0A060SYN0_BLAAD | 41.40% | 843 | 0.0 | ARAD1C02442p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C02442g PE=4 SV=1 |
| A0A1D8PNG5_CANAL | 37.13% | 870 | 3e-180 | Utp13p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UTP13 PE=4 SV=1 |
| UTP13_YEAST | 36.78% | 889 | 1e-164 | U3 small nucleolar RNA-associated protein 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTP13 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.4170
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
-
Repeat
1
100
200
300
400
500
600
700
800
852
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
structural tetrad ...
-
structural tetrad ...
Protein sequence
>MCA_04491_1 MSLDKKTLKRFFDHTAIEPFYNGGAVSLSKDGKLLSTTLDDEVIVTDFETGERICRIRGDTSDITAQQLSPDGKYLVTCS ESLKLSTYRIPEGELIRPVRAHDTPVFSIAVDPTSTLVATGGGDGSVKVWDIEKGFVTHNLKGHGSLISSLKFWGDYGSS QWWLASASDIDYKIRVWDLVKSRSIATLTMHDSVVRALDFSHDGKMLISGGRDKVINVWNINSKTQTNDREEGDKKKQNV IVKFHHQVTIPALDPVECLGFFAPGVLTTDPTEQIIYSGGEKGITNIWSLKDMKRLSTKAHRLEDSTEETSIQQMIYSPD RNILLNVLSDDTLLEIPLVSTELQVRRRIGGNHGEIIDCVFLGDNFTNEVLGETQDEEQYLAIATNSPEVRILKQTGLSH TVLSGHKDIVLAIDRSVDGCWLATAGKDGQAKLWNLQSLIQHSSGTLIDSFEESFCTFSGHVSSIGAIALPRTPTVINEN STDEEIPPPKFLVTGSQDLTVKVWIIPRNKDEKPRAIITRKAHEKDINAIDVSPDNRFFATASQDKTTKIWDIETGDSVA ILSGHKRGVWSVKFNPYQKNIATSSGDKTVMLWNLNDYTPIRTFEGHTNSVLKLAFLTNGLQLASSGGDGLVKIWNTNTG ECDVTLDNHEDKVWCLSMSEDDKTLMSGGGDGVITFWKDVTEDRLEEEREEENQLIEQQQQLENYVNQKDWKNAIILALS LNHPYQLLKLFSTVMEKNADPESITGLFAVDQAIAELGNTSNKDGEDNYLLNKLLTRVRDWNTNARTATVAQTVLHAIIC HYSTEELCNLKELSSCVDGLLPYTERHIDRVEGLIEQSFMLDYVLQSMERVL
GO term prediction
Biological Process
GO:0006364 rRNA processing
Molecular Function
GO:0005515 protein binding
Cellular Component
GO:0032040 small-subunit processome