Protein
MCA_04474_1
Length
294 amino acids
Browser: contigC:3139342-3140227-
RNA-seq: read pairs 220, FPKM 9.2, percentile rank 24.7% (100% = highest expression)
Protein function
| EGGNOG: | 0PGPZ | to reverse transcriptase | |
|---|---|---|---|
| SGD closest match: | S000007347 | TY3B-G | Transposon Ty3-G Gag-Pol polyprotein |
| CGD closest match: | CAL0000175689 | POL93 | Pol93p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A060T683_BLAAD | 35.61% | 278 | 5e-45 | ARAD1B13926p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B13926g PE=4 SV=1 |
| UniRef50_A0A060T683 | 35.61% | 278 | 1e-41 | ARAD1B13926p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T683_BLAAD |
| B5FVH8_YARLI | 30.65% | 261 | 1e-29 | YALI0E14388p2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E14388g2 PE=4 SV=1 |
| A0A1D8PC70_CANAL | 44.23% | 104 | 1e-15 | Pol93p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=POL93 PE=4 SV=1 |
| YG31B_YEAST | 35.51% | 107 | 5e-14 | Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3 |
| A0A167D9C8_9ASCO | 43.68% | 87 | 2e-13 | Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_901 PE=4 SV=1 |
| A0A0J9XCS2_GEOCN | 33.85% | 130 | 2e-10 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA10s00604g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1044
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
294
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
Catalytic residue ...
-
catalytic motif cd...
-
inhibitor binding ...
-
Active site flap c...
Protein sequence
>MCA_04474_1 MEISKIDINAVTPDDGPEIGKKIVVPTCIKLQSRDWKPRFNALIDSGAASYFVSHEAIQRNHLEHLTVPCPPIKLSSAFS NSQTCKRKVQLTFHIGPIEATKSFFVVHGLSHDMILGTPFTAEFADFVDLKSFSVAGVGSVADDPLFVSAIEFERLAKSK ENAIGICVLKFDEPVKEPASLEVLPFDASEYKDVLTNDPPTGLPPERDVTHPIDVVPGSTPPYRSYYRLSKAESDYLTEE LSKMANTGMIRPSSSPYSAPVLFVKKKDGSLRLCVDYRMLNNITIKKPLSSSLH
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.