MCA_04432_1

Browser: contigC:3034740-3035649-

RNA-seq: read pairs 48, FPKM 2.0, percentile rank 11.6% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0801

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   302 - 302

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   20 - 282

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 19

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   15 - 19

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   6 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 19

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TMhelix
   279 - 301

   TMHMM
   TMhelix (TMhelix)
9. TRANSMEMBRANE (Tran...)
   283 - 301

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
10. mobidb-lite (disord...)
    186 - 208

    MobiDB Lite
    mobidb-lite (disorder_prediction)

Protein sequence

>MCA_04432_1
MMHVKTFLFSLLLVYKSLAAPINEETTTVYEDCTDEVSVIPSPTVSPHSTVQFYSNKTFSTFIAEKVEQIKESSAHKDSE
SIVLEITPSLGAPVPYVTTTATTTKKVVSVTTFTKPKDTATVFLDIVSVDIGISVEGVSSVSKRSTSTITSTTTSTITLP
EKQTIEADSTTTVFIDCDKTSSGISNTPEANSIITSETKSSFKQTNTPGVASAITSETKEASAEPTNTPQVTTSIVSIIT
SVDPEEEITIYSTIYSTITLALPSETTLAQTNNAGHTQGNIEIVITGAVILASISLIFITAL

GO term prediction