Protein
MCA_04426_1
Length
368 amino acids
Gene name: CWC26
Description: Pre-mRNA-splicing factor CWC26
Browser: contigC:3018197-3019304-
RNA-seq: read pairs 495, FPKM 16.6, percentile rank 36.4% (100% = highest expression)
Protein function
| Annotation: | CWC26 | Pre-mRNA-splicing factor CWC26 | |
|---|---|---|---|
| KEGG: | K13106 | BUD13 | pre-mRNA-splicing factor CWC26 |
| EGGNOG: | 0PPQU | CWC26 | Pre-mRNA-splicing factor CWC26 |
| SGD closest match: | S000003142 | BUD13 | Pre-mRNA-splicing factor CWC26 |
| CGD closest match: | CAL0000192262 | CWC26 | Pre-mRNA-splicing factor CWC26 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03917_1 | 33.77% | 385 | 1e-36 | MIA_03917_1 |
| A0A0J9X9G8_GEOCN | 37.50% | 240 | 5e-31 | Similar to Saccharomyces cerevisiae YGL174W BUD13 Subunit of the RES complex, which is required for nuclear pre-mRNA retention and splicing OS=Geotrichum candidum GN=BN980_GECA05s07358g PE=4 SV=1 |
| UniRef50_A0A0J9X9G8 | 37.50% | 240 | 1e-27 | Similar to Saccharomyces cerevisiae YGL174W BUD13 Subunit of the RES complex, which is required for nuclear pre-mRNA retention and splicing n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9G8_GEOCN |
| A0A1E3PKI7_9ASCO | 29.47% | 302 | 1e-24 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_78614 PE=4 SV=1 |
| A0A060TAE0_BLAAD | 33.61% | 238 | 1e-23 | ARAD1D26312p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D26312g PE=4 SV=1 |
| A0A167CV25_9ASCO | 31.68% | 303 | 5e-22 | Bud13p OS=Sugiyamaella lignohabitans GN=BUD13 PE=4 SV=1 |
| A0A1E4TJY8_9ASCO | 49.09% | 55 | 4e-12 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_42656 PE=4 SV=1 |
| CWC26_YARLI | 47.27% | 55 | 1e-11 | Pre-mRNA-splicing factor CWC26 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CWC26 PE=3 SV=1 |
| CWC26_YEAST | 54.35% | 46 | 1e-10 | Pre-mRNA-splicing factor CWC26 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BUD13 PE=1 SV=1 |
| CWC26_CANAL | 55.26% | 38 | 1e-08 | Pre-mRNA-splicing factor CWC26 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CWC26 PE=3 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1338
Protein family membership
- Bud13 (IPR018609)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04426_1 MSSLNDYLASKYLSDKPAKKSKKSKKSKQATPLTNTNVLVDDDDLSIPSKQNRALTFKEYASSLKNKAIDDDDEDDIQEQ PDTSKPSKRATWKKVGQADATSTTELKKQAPETAVKDGIDNEDDTSQYYGLQTASQIAARMEAKAKEDERIMRELEQEYK NNGIDHHQTVYRDKAGRQIDEQDLDELRKQKEQEREEEARRKQDFERKQRLVNEGFVQAYERKLQSRRSRDGDDGAQNTY TRSIEDKELNDELKSKVDLFNDPAASFLSSSNNKNKKKRKTIEEKEQQSIQKYKKHKTKEEEDNDDDEITPNDLGYYKDA YPPNRFGIRPGILWDGVDRSNGFEKLWFRKESEIKTKQANQYANTYDL
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.