Protein
MCA_04423_1
Length
533 amino acids
Gene name: NUP49
Description: FG-nucleoporin NUP49
Browser: contigC:3009375-3010977-
RNA-seq: read pairs 2017, FPKM 46.7, percentile rank 63.8% (100% = highest expression)
Protein function
| Annotation: | NUP49 | FG-nucleoporin NUP49 | |
|---|---|---|---|
| KEGG: | K14307 | NUPL1 | nucleoporin p58/p45 |
| EGGNOG: | 0QEBI | NUP49 | NA |
| CGD closest match: | CAL0000193504 | NUP49 | FG-nucleoporin |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03919_1 | 56.83% | 271 | 4e-81 | MIA_03919_1 |
| A0A167CV63_9ASCO | 36.15% | 260 | 1e-39 | FG-nucleoporin NUP49 OS=Sugiyamaella lignohabitans GN=NUP49 PE=4 SV=1 |
| UniRef50_A0A167CV63 | 36.15% | 260 | 3e-36 | FG-nucleoporin NUP49 n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167CV63_9ASCO |
| A0A0J9X8P1_GEOCN | 58.82% | 102 | 1e-28 | Similar to Saccharomyces cerevisiae YGL172W NUP49 Subunit of the nuclear pore complex (NPC), required for nuclear export of ribosomes OS=Geotrichum candidum GN=BN980_GECA05s07369g PE=4 SV=1 |
| A0A1E3PKJ7_9ASCO | 50.00% | 78 | 1e-18 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51223 PE=4 SV=1 |
| A0A060TGV9_BLAAD | 41.58% | 101 | 1e-15 | ARAD1D26356p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D26356g PE=4 SV=1 |
| Q6CAZ4_YARLI | 41.03% | 78 | 2e-11 | YALI0C23166p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C23166g PE=4 SV=1 |
| A0A1E4TBB5_9ASCO | 32.53% | 83 | 3e-10 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_28790 PE=4 SV=1 |
| A0A1D8PFQ0_CANAL | 32.00% | 75 | 8e-07 | FG-nucleoporin OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NUP49 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0090
Protein family membership
None predicted.
Domains and repeats
-
Repeat
1
50
100
150
200
250
300
350
400
450
500
533
Detailed signature matches
-
-
PF13634 (Nucleopori...)
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04423_1 MTGFVFGANGNGSSIFGNSTTSTTNNNLFGNNNNSNASKPSLGGTSNTSGGLFGNNNNTTSGGLFGNNNSTSTNTGGSTF GSNTNTGSNLFGNNNNSSNTGNTFGNNTNTNTGGGLFGGNANSSNSLTTTNSGGGLFGAKPATTFGSNTTTSNTSTGNLF GGNTNNNTTSNTGSNLFGGNSNISTNNTTTTGTSSGLFGAANKPATSNLFGGNTGNTNTSNTGSSLFGGGNTGNTATNTN TNNAGAITAPGGATNNNENNSNMITSIHQITSTTRCGDLPEQARRELIAIEMFIKSESRISEDIKSRHDTLNFNVSTVPQ DCDLLSRKLTTTIEALKYDEHVLNKLRDQSDSAAADSDACINLFGHLRLPTSNENSNNGNNNGNNPDENNMQNLGGGIVG PIGSLNRSVLGGRISSYGNVIPNSNLNSSIAGGAPPNTNSNSNSSFFVQGVDPLLPYFESKIDEFSAKLQEYANIIQEAE NAIESIQQEATEGFRNVQNIITALQEEYLFFMGLGNRVAELHQNVRQLAVTAK
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.