Protein
MCA_04409_1
Length
248 amino acids
Gene name: HCR1
Description: Eukaryotic translation initiation factor 3 subunit J
Browser: contigC:2916533-2917280+
RNA-seq: read pairs 4852, FPKM 240.8, percentile rank 90.1% (100% = highest expression)
Protein function
| Annotation: | HCR1 | Eukaryotic translation initiation factor 3 subunit J | |
|---|---|---|---|
| KEGG: | K03245 | EIF3J | translation initiation factor 3 subunit J |
| EGGNOG: | 0PGKV | HCR1 | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity) |
| SGD closest match: | S000004182 | HCR1 | Eukaryotic translation initiation factor 3 subunit J |
| CGD closest match: | CAL0000183414 | HCR1 | Eukaryotic translation initiation factor 3 subunit J |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00676_1 | 69.75% | 238 | 3e-84 | MIA_00676_1 |
| A0A0J9XKM0_GEOCN | 55.83% | 240 | 2e-69 | Eukaryotic translation initiation factor 3 subunit J OS=Geotrichum candidum GN=HCR1 PE=3 SV=1 |
| A0A167CFU6_9ASCO | 51.68% | 238 | 2e-46 | Eukaryotic translation initiation factor 3 subunit J OS=Sugiyamaella lignohabitans GN=HCR1 PE=3 SV=1 |
| UniRef50_A0A167CFU6 | 51.68% | 238 | 5e-43 | Eukaryotic translation initiation factor 3 subunit J n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A167CFU6_9ASCO |
| A0A060T5Y7_BLAAD | 49.30% | 142 | 4e-42 | Eukaryotic translation initiation factor 3 subunit J OS=Blastobotrys adeninivorans GN=HCR1 PE=3 SV=1 |
| EIF3J_YARLI | 37.45% | 235 | 4e-24 | Eukaryotic translation initiation factor 3 subunit J OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=HCR1 PE=3 SV=1 |
| A0A1E3PP08_9ASCO | 40.73% | 248 | 6e-24 | Eukaryotic translation initiation factor 3 subunit J OS=Nadsonia fulvescens var. elongata DSM 6958 GN=HCR1 PE=3 SV=1 |
| EIF3J_CANAL | 38.06% | 134 | 3e-15 | Eukaryotic translation initiation factor 3 subunit J OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HCR1 PE=3 SV=1 |
| EIF3J_YEAST | 31.20% | 125 | 2e-12 | Eukaryotic translation initiation factor 3 subunit J OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HCR1 PE=1 SV=1 |
| A0A1E4TD95_9ASCO | 37.38% | 107 | 3e-12 | Eukaryotic translation initiation factor 3 subunit J OS=Tortispora caseinolytica NRRL Y-17796 GN=HCR1 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0089
Protein family membership
Domains and repeats
-
Domain
1
50
100
150
200
248
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04409_1 MSNWDDEDYDADLASSNLKASWDDEEEDAAFDSWENALDDDDEKKAPARKHVPLKEKIKEREEKERLEREAKALALREEN EAEKKERLKKLEQENDMANVADLMGDIDIHPRAKQTAKVTAAATQAAAGPSKLSDLKIFNPTNKQEFEDLRKTITPILKD LQKVSSIHYPNLVTDLSRDLTKTLNQDQIRKVISTLNAVLSEKQRADRANRGKKPKAQLKGLSSKVDESKDTTNYDDIPD DFGDDDFM
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003743 translation initiation factor activity
Cellular Component
GO:0005737 cytoplasm
GO:0005852 eukaryotic translation initiation factor 3 complex