Protein

MCA_04406_1

Length
695 amino acids

Gene name: PUF6

Description: Pumilio homology domain family member 6

Browser: contigC:2910398-2912486-

RNA-seq: read pairs 2557, FPKM 45.4, percentile rank 63.2% (100% = highest expression)

Protein function

Annotation:PUF6Pumilio homology domain family member 6
KEGG:K14844PUF6 pumilio homology domain family member 6
EGGNOG:0PGYRPUF6pumilio-family RNA binding domain-containing protein
SGD closest match:S000002904PUF6Pumilio homology domain family member 6
CGD closest match:CAL0000178700orf19.3547Uncharacterized protein

Protein alignments

%idAln lengthE-value
MIA_00680_156.54%5960.0MIA_00680_1
A0A0J9X5M6_GEOCN45.38%5733e-146Similar to Saccharomyces cerevisiae YDR496C PUF6 Pumilio-homology domain protein that binds the 3' UTR of ASH1 mRNA and represses its translation OS=Geotrichum candidum GN=BN980_GECA03s02441g PE=4 SV=1
A0A161HF31_9ASCO41.12%5694e-126Puf6p OS=Sugiyamaella lignohabitans GN=PUF6 PE=4 SV=1
A0A1E3PSA9_9ASCO39.76%5761e-119ARM repeat-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_44911 PE=4 SV=1
A0A060T4W7_BLAAD39.53%5541e-117ARAD1B06424p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B06424g PE=4 SV=1
Q6C1D0_YARLI38.53%5713e-114YALI0F17358p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F17358g PE=4 SV=1
UniRef50_Q6C1D038.53%5718e-111YALI0F17358p n=6 Tax=Saccharomycetales TaxID=4892 RepID=Q6C1D0_YARLI
A0A1E4TBB7_9ASCO33.91%5781e-104Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_148426 PE=4 SV=1
PUF6_YEAST33.92%5721e-91Pumilio homology domain family member 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUF6 PE=1 SV=1
A0A1D8PHC4_CANAL35.60%5871e-87Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3547 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1165
Predicted cleavage: 15

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Repeat
1 100 200 300 400 500 600 695

Detailed signature matches

  1. Domain IPR016024
    Armadillo-type fold
    1. SSF48371 (ARM repeat)
  2. Domain IPR011989
    Armadillo-like helical
    1. G3DSA:1.25.10.10
  3. Domain IPR033133
    Pumilio homology domain
    1. PS50303 (PUM_HD)
  4. Domain IPR012959
    CPL domain
    1. PF08144 (CPL)
  5. Repeat IPR001313
    Pumilio RNA-binding repeat
    1. SM00025 (pum_5)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_04406_1
MPSKVKSSTSVKRKQAVTEEKPTNKKVKTEKKSTKKSQPKEISDDELELSSSSEEEQDDSSSSDGSDSESEEEEEDELEE
AGDEKDQENSENKTSSKEAHAKQKQIKEERRMAKPNSDVIQNVKTLWERLRVKKGITPEARKKLIAEAWTLSEPILKELA
LKHDTSRVVQTMIKYSDNNIRHEITIRLEPIFYELAISSYGKYLIIKLLHYAANNQKERDFICYKLLKGKPGIARRLMRH
KHGAYVLEDMFRYYASPKYKQEIIFQFFDPENGNAASSMKRKITDKKNGKKADASTEAEDLIGDRDYSSVAEMFEKYPER
RPDAMKFAFKRLQAAVEKGSIGFNVVHAVMLNYISNAFQDTSEAREFIDLITEQFPEIVHTPEGSETASIVLSIATAKER
KNLVRALRQFIFELATDDNGCFVLISLFDTIDDTVLIKKALGDSLQEHMPGLLTSKHGRKPLLYLLLGGPNSRYFAKSQI
EFINDKIGELKKKTSKKSDEARLREHLKNYSKAMLECVAEYPGKMFETTIGSQTTVEVLLYAIDEEVTEEDGTTVSLKDK
ALKSLAQTFKGDVKDTSVFKQSFSSRALRILIQGGHWNHEKKQVDVVKKNERLGEDESSNEPAVGNFKLYLHEAILDNIK
DWATSNEGSFVVVALLDNLDKKSSEYKELVKGLKKYKKDIEKKKVKGHQIILSHL

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003723 RNA binding
GO:0005488 binding

Cellular Component

None predicted.