Protein
MCA_04404_1
Length
1,421 amino acids
Browser: contigC:2904131-2908478-
RNA-seq: read pairs 1522, FPKM 13.2, percentile rank 31.2% (100% = highest expression)
Protein function
| KEGG: | K11373 | ELP1 | elongator complex protein 1 |
|---|---|---|---|
| EGGNOG: | 0PG97 | PGUG_04171 | Elongator complex protein 1 |
| SGD closest match: | S000004376 | IKI3 | Elongator complex protein 1 |
| CGD closest match: | CAL0000201272 | orf19.2631 | Elongator subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01698_1 | 57.33% | 1446 | 0.0 | MIA_01698_1 |
| A0A0J9XI21_GEOCN | 51.49% | 1445 | 0.0 | Elongator complex protein 1 OS=Geotrichum candidum GN=BN980_GECA18s01880g PE=3 SV=1 |
| UniRef50_A0A0J9XI21 | 51.49% | 1445 | 0.0 | Elongator complex protein 1 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XI21_GEOCN |
| A0A167D378_9ASCO | 47.12% | 1475 | 0.0 | Elongator complex protein 1 OS=Sugiyamaella lignohabitans GN=IKI3 PE=3 SV=1 |
| A0A1E3PRC1_9ASCO | 45.60% | 1465 | 0.0 | Elongator complex protein 1 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48542 PE=3 SV=1 |
| A0A060SX97_BLAAD | 47.11% | 1437 | 0.0 | Elongator complex protein 1 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A07634g PE=3 SV=1 |
| ELP1_YEAST | 41.08% | 1463 | 0.0 | Elongator complex protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IKI3 PE=1 SV=1 |
| A0A1E4T9P2_9ASCO | 37.65% | 1235 | 0.0 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_17514 PE=4 SV=1 |
| Q6C0Y9_YARLI | 35.52% | 504 | 4e-75 | Elongator complex protein 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F20658g PE=3 SV=1 |
| A0A1D8PMB2_CANAL | 45.91% | 342 | 1e-59 | Elongator subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2631 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2763
Protein family membership
- Elongator complex subunit Iki3 (IPR006849)
Domains and repeats
-
Domain
1
200
400
600
800
1000
1200
1421
Detailed signature matches
-
-
PF04762 (IKI3)
-
PIRSF017233 (IKAP)
-
-
-
SSF50978 (WD40 repe...)
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04404_1 MRNLILAGKRQLQSESLTVPDLQLADVCIDPIDSTSYLIYQPSKDFNSIEIQKVSKTGEISVFASWPLPEPEFDENADEE NISIPTIRCCHYFGLTSSLVLVLSNGDIISVSLPGSANQMDYYYNEESQFDEMPQEPTNQDDQDPDIQIVGSIPGGISAA CWSPDEEILAIATNSNTFVLLTRFFEPISEATITTKDLKLSKHVSVGWGKKETQFEGRGAKALRDPTMPEHVDLGLLNES DFIDPRTCEISWRGDGEVVSVSCIDKLEDGAGERRTIRVYTRDGTLNSVTEPVDYLTNATAWRPSGNLIASIQRKDQLGQ IKTPQVVFFERNGLRRGQFSLRLPENDESLAIFCPAWNTDSDCLALIVGNTIQIWTTKNYHWYLKQELSSPGFTPSKIFW HPEQSHTLIAISSETNSILFYDFQWDITRGTTAPDTDIGLVVVVDGKNLKLTPLAIANTPPPMAFRTFTQLEMTPTHVAV SKSNEILAILSGSNLIIAKWNPTIMKNGGLVRNIKTPEVVNSFAIDELQIFEQPKQLAFIGDDYLAIAVDHETDFSSAST SSEIVIAKFSSDHKSLEVVSSHTINEQVYLLKSLPTADNAVFETLNGTVYSFSGNDYSQVNRITKLPKRCDAIEVYFPNA ENDLPSFGDVDEYEEGAAGQSFYQNNINDPSTAIVFGLHKNGKLYANTKQIASSATSLCMTDRYLAFTTAQHYLKFCHLA QYPELISVPSDSSVDDERCRAIERGSLIVTAMPSKSSFTLQAPRGNLETFYPRIMTLAGVRQYIKEKRYDLAFSLCRVHR IDLNILYDYMPEQFLELTELFISQMKTPEYIDLFVSGLQEEDVSLTKYKDTIKEIENTPQTIPGLESEAWNLPGKMEGLS INESINGAKENSTAKKNKNDMPVTNGKVNKICDAFISILNTDKYKVQFNQSILTSYACKTPPALEEALALAGKTMTSDPE LTNISIQHLCFLQDVNLLYDTALGIYDLPLTLLIAQQSTKDPKEYLPFLRNLQSLDPLRRKFEIDTYLKRYSKALISLSQ IEGEDAFLELQDYVIDHNLYTQALEIFKYNQPKQDKILELQAEYFYKQAEYQKSGLLYEMLGQYTSALDSYKLGTCWEQA LSIIDRNPDGTFDAEKILQVADELADKTYDAHDYKASATIQLHYLSNPVEACKCLCKGFFFNDAIMIASRYTTGPNAKST YKEILESTLEPGLMEGFNQISELLADCNSQINSQLARLRELREKKLQDPFAFFGGNTNAQESEILDNVSIAPSETSTAPS FFTQYTGKTGGTAQTGASRRTAKNRRREERKRARGKKGSVYEEEYLINSMGRLIERLHEVQPDALKLIDGLLRCNKRTHA YQIQKEYKKIMETLEGCAEEVFFLSLKDRERINEDDGTVYYIEQREIPTIKKFPVNEILDY
GO term prediction
Biological Process
GO:0002098 tRNA wobble uridine modification
GO:0006355 regulation of transcription, DNA-templated
Molecular Function
GO:0005515 protein binding
Cellular Component
GO:0033588 Elongator holoenzyme complex