Protein

MCA_04358_1

Length
837 amino acids

Description: putative endonuclease Ctp1

Browser: contigC:2794185-2796887-

RNA-seq: read pairs 346, FPKM 5.1, percentile rank 17.5% (100% = highest expression)

Protein function

Annotation:putative endonuclease Ctp1
EGGNOG:0PSHEFG10291.1conserved hypothetical protein

Protein alignments

%idAln lengthE-value
MIA_01721_129.54%2371e-19MIA_01721_1
Q6CAW9_YARLI27.72%2023e-20YALI0C23727p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C23727g PE=4 SV=1
UniRef50_Q6CAW927.72%2027e-17YALI0C23727p n=2 Tax=Yarrowia lipolytica TaxID=4952 RepID=Q6CAW9_YARLI
A0A060TB93_BLAAD23.79%2276e-12ARAD1D26114p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D26114g PE=4 SV=1
A0A0J9XI27_GEOCN22.92%2405e-10Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA18s00670g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0116

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 837

Detailed signature matches

  1. Domain IPR013882
    DNA endonuclease Ctp1, C-terminal
    1. PF08573 (SAE2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_04358_1
MQSQADSALQLEKIRDSNEDEILNLQSQFSKTIELILQRQNDLKSQLKDANLQIKRLQYQLSTASTKAKAYANFVDILRR
KRNGDKEKLKAWKNKFHELLEKLGDKYPEEVEKRYSSFGPLSSDLEEEPENFDVTSNPVVEHTSIESKYDANEGDKTVIP
NENFPENSLVASNYSETNAEYAFQDVNAETDNSTEEKPPQTSSSTTVSFVSRRDDLPSSPVTEFVQNTSSPYSDSSPLKD
VTPVIKKERALIAKDQLEYGSKESVSEPKALTNYGYDSPENLDRVKDSELFQTPDFKGFNDKGKNRTKHKKVTREVNLGP
FYFNETLESQSYSEEAALDKRSQPNTIPTTDTTISPGESLDEPMGDEVKQMPTIKFEQGLVTPQTEGQKRLNHIPLSSLK
PNNNTVIYEGGSNEGGFTSHSGRQGKREFPFDIDTELMNPDNIIPDLATFNKNKKKKKCSASNLNTRRVHEKILPSLSTP
PDTVNKSATLSSKSNRLEYFFNRQSSSNKPQLSKNKAAETSNNREDQQNSIISISSSEESQLDYIESIKEIETPTRIINK
INDKNSSDGSSKKDISENNSPLIEGNENDFPTKSTVEKAPKFEKMSNQEVIDYIMSYKNWTPDDFMLNPKFIEDDNFEPN
KTIKTNQYSCTHGANCVQCKEFYELAGPGIQTVGLKWNESEQSDPAENEKNLDEQDLSELLDNAEGLSDNNSKTLNVQDK
GTKSGVRNSELVSKKSKLVPTDEIRSSSVKNRTRVAVARQPSPEGFWRSDFPTTQELRKEREIASARRIQLAKERFSEAI
KGVPKNICKGNYDEFAGRYIFRNKALRERLNKIKYHV

GO term prediction

Biological Process

GO:0006281 DNA repair

Molecular Function

GO:0004519 endonuclease activity

Cellular Component

None predicted.