Protein
MCA_04350_1
Length
404 amino acids
Gene name: RPC37
Description: DNA-directed RNA polymerase III subunit RPC5
Browser: contigC:2770440-2771655-
RNA-seq: read pairs 874, FPKM 26.7, percentile rank 49.4% (100% = highest expression)
Protein function
| Annotation: | RPC37 | DNA-directed RNA polymerase III subunit RPC5 | |
|---|---|---|---|
| KEGG: | K14721 | RPC5 | DNA-directed RNA polymerase III subunit RPC5 |
| EGGNOG: | 0PN13 | RPC37 | RNA Polymerase III subunit |
| SGD closest match: | S000001733 | RPC37 | DNA-directed RNA polymerase III subunit RPC5 |
| CGD closest match: | CAL0000182770 | orf19.6903 | DNA-directed RNA polymerase III subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01213_1 | 56.69% | 344 | 3e-109 | MIA_01213_1 |
| A0A0J9X339_GEOCN | 54.79% | 219 | 5e-82 | Similar to Saccharomyces cerevisiae YKR025W RPC37 RNA polymerase III subunit C37 OS=Geotrichum candidum GN=BN980_GECA02s01737g PE=4 SV=1 |
| UniRef50_A0A0J9X339 | 54.79% | 219 | 1e-78 | Similar to Saccharomyces cerevisiae YKR025W RPC37 RNA polymerase III subunit C37 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X339_GEOCN |
| A0A1E3PM26_9ASCO | 49.54% | 218 | 1e-71 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_22565 PE=4 SV=1 |
| Q6C8I0_YARLI | 43.38% | 219 | 4e-62 | YALI0D19448p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D19448g PE=4 SV=1 |
| A0A167BX72_9ASCO | 45.89% | 207 | 5e-61 | Rpc37p OS=Sugiyamaella lignohabitans GN=RPC37 PE=4 SV=1 |
| A0A060TC44_BLAAD | 39.91% | 213 | 1e-56 | ARAD1D39292p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D39292g PE=4 SV=1 |
| A0A1E4TBB9_9ASCO | 33.16% | 187 | 5e-24 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_132840 PE=4 SV=1 |
| RPC5_YEAST | 27.73% | 220 | 1e-18 | DNA-directed RNA polymerase III subunit RPC5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPC37 PE=1 SV=1 |
| A0A1D8PQS2_CANAL | 30.52% | 213 | 2e-17 | DNA-directed RNA polymerase III subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6903 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0086
Protein family membership
- DNA-directed RNA polymerase III subunit Rpc5 (IPR006886)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_04350_1 MEEDDSLFVSSEPFKIKKEPGLESEEDSLFVTSLDFPTEPEASSSNSIQQNLQEALVKTTSTNTKKNSGNSKSKKASSTK STRSTSETLNALYEGDNVIAFDATPELVLNDEDGEDEVVEEYPMYYSTELLQKLYILQYPTRPATRPFVDVNGTGILDSR IKPEGQAIEVDVPIDTTKFYDKEKAENWGNVDKQTYGGIAKHVPGYMIGVFKDNALHLNPVHATAQLRPQFHYASQAGQA QNNSTDKEKEAAQTKRAPKAVQLTAKIVGDNAPSFSGALIATKKLEDESFIGMDWYDRDSEESWDIADSLIAKKRDPLVE KTTKDEYIASISSPHVDPVAVAAANFAAKQQAEMKPVKPVRTPKATPAKGKQKAKATPAKTTPAKATPAKATPAKTTTVK KSQK
GO term prediction
Biological Process
GO:0006351 transcription, DNA-templated
Molecular Function
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
Cellular Component
GO:0005634 nucleus